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Job DescriptionP19319
Confidence100.00%DateThu Jan 5 11:37:17 GMT 2012
Rank6Aligned Residues791
% Identity23%Templatec1vlfQ_
PDB info PDB header:oxidoreductaseChain: Q: PDB Molecule:pyrogallol hydroxytransferase large subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici complexed3 with inhibitor 1,2,4,5-tetrahydroxy-benzene
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70......... 80.........90.........100.........110..
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Query Sequence  KIVRSTHGVNCTGSCSWKIYVKNGLVTWEIQQTDYP. . . . . . . . . . . RTRPDLPNHEPRGCPRGASYSWYLYSANRLKYP
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Template Sequence  EVVRLT. . . NSSTGGPVFVYVKDGKIIRMTPMDFDDAVDAPSWKIEARGKTFTPPRKTSIAPYTAGFKSMIYSDLRIPYP
Template Known Secondary structure 

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TT

TT

B

TTTS




TT


SB



TTT
TTB

S
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   3..... .10.........20.........30.........40.........50.........60.........70.........
 
   113......120.........130.........140.........150. ........160.........170....
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Query Sequence  LIRKRLIELWREALKQHSDPVLAWASIMNDPQKCLSYKQ. . . . . . . . . . . . . . . . . . VRGRGGFIRSNWQELNQLIAAAN
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Template Sequence  MKR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KSFDPNGERNPQLRGAGLSKQDPWSDYERISWDEATDIVVAEI
Template Known Secondary structure  ..................................TT

TTS


GGGTTTT
GGGG

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   80.. .......90.........100.........110.........120.....
 
   175....180.........190...... ...200.........210.........220..... ....230.........240 ...
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Query Sequence  VWTIKTYGPDRVAGFSPIPAMS. . . MVSYAAGTRYLSLLGGTCLSFYDWYCDLP. PASPMTWGEQTDVPE. . . . . . . SAD
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Template Sequence  NRIKHAYGPSAILSTPSSHHMWGNVGYRHSTYFRFMNMMGFTYADHNPDSWEGWHWGGMHMWGFSWRLGNPEQYDLLEDG
Template Known Secondary structure  T
GGG

S


S
TTTSTTT




GGGT

GGGTT



TT
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   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   244.....250.........260..... ....270.........280.........290. ........300.........310.......
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Query Sequence  WYNSSYIIAWGSNVPQTRTPDA. . . . . HFFTEVRYKGTKTIAITPDYSEVAKL. CDQWLAPKQGTDSALAMAMGHVILKE
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Template Sequence  LKHAEMIVFWSSDPETNSGIYAGFESNIRRQWLKDLGVDFVFIDPHMNHTARLVADKWFSPKIGTDHALSFAIAYTWLKE
Template Known Secondary structure 
SS


SSS
TTTTTT

SB


S


TT
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   206...210.........220.........230.........240.........250.........260.........270.........280.....
 
   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  FHLDNPSDYFINYCRRYSDMPMLVMLEPRDDGSYVPGRMIRASDLVDGLGESNNPQWKTVAVNTAGELVVPNGSIGFRWG
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Template Sequence  DSYDK. . . . . . EYVAANAHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
S
......S............................................................
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   286...290 .........
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  EKGKWNLESIAAGTETELSLTLLGQHDAVAGVAFPYFGGIENPHFRSVKHNPVLVRQLPVKNLTLVDGNTCPVVSVYDLV
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Template Conservation  ............................................................................    
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FEEW
Template Known Secondary structure  ............................................................................
Template Predicted Secondary structure  ............................................................................
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   300...
 
   478.480.........490.........500.........510.........520.........530.........540.. .......550...
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Query Sequence  LANYGLDRGLEDENSAKDYAEIKPYTPAWGEQITGVPRQYIETIAREFADTAHKTHGRSMIILGA. . . . GVNHWYHMDMN
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Template Sequence  AD. . . . . . . . . . . . YVLGKTDGTPKTCEWAEEESGVPACEIRALARQWAKK. . . . . NTYLAAGGLGGWGGACRASHGIEW
Template Known Secondary structure  ............TTTTTS




S
S.....
TTTTS

GGGSBTT
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   304. ....310.........320.........330.........340.. .......350.........360......
 
   554.....560.........570.........580.........590.........600.........610.........620.........630...
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Query Sequence  YRGMINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWLPLAFALDWNRPPRQMNSTSFFYNHSSQWRYEKVSAQELLSPLA
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Template Sequence  ARGMIALATMQG. MGKPGSNMWSTTQGVPLDYEFYFPGYAEGGISGDCENSAAGFKFA. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT.TTSTT


SSS




TTS



GGG
TTS

TTTSSGGGT......................
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   367..370........ .380.........390.........400.........410.........420...
 
   634.....640.........650.........660.........670.........680.........690.........700.........710...
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Query Sequence  DASKYSGHLIDFNVRAERMGWLPSAPQLGRNPLGIKAEADKAGLSPTEFTAQALKSGDLRMACEQPDSSSNHPRNLFVWR
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Template Sequence  . . . . . . WRMFDGKTTFPSPSNLNTSAGQHIPRLKIPECIMGGKFQWSGKGFAGGDISHQLHQYEYPAPGYSKIKMFWKYG
Template Known Secondary structure  ......

SSS





SSSSTTS
GGGS


SS

SSGGGGG
S
TT




S
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   424.....430.........440.........450.........460.........470.........480.........490.......
 
   714.....720.........730.........740.........750.........760.. .......770.........780.........790.
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Query Sequence  SNLLGSSGKGHEYMQKYLLGTESGIQGEELGASDGIKPEEVEWQTAAIE. . GKLDLLVTLDFRMSSTCLFSDIVLPTATW
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Template Sequence  GPHLGTMTATN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RYAKMYTHDSLEFVVSQSIWFEGEVPFADIILPACTN
Template Known Secondary structure 

SSST................................TT
TT

SBS
TTGGG
SB

G
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   498.500........ .510.........520.........530.........540.....
 
   792..... ..800.........810.........820.........830.........840.........850........
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Query Sequence  YEKDDM. . . . . . . . . . . . . NTSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKAFSQVCVGHLGKETDVVLQPLLHDSPA
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Template Sequence  FERWDISEFANCSGYIPDNYQLCNHRVISLQAKCIEPVGESMSDYEIYRLFAKKLNIEEMFSEGKDELAWCEQYF. . . . .
Template Known Secondary structure  GGS
TT

BTTBTTGGGGSSS



S

STT
B
TT
TT

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   546...550.........560.........570.........580.........590.........600.........610.........620
 
   859860.........870.........880.........890.........900.........910.........920.........930........
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Query Sequence  ELSQPCEVLDWRKGECDLIPGKTAPNIVAVERDYPATYERFTSLGPLMDKLGNGGKGISWNTQDEIDFLGKLNYTKRDGP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . NATDMPKYMTWDEFFKKGYFVVPDNPNRKKTVALRWFAEGREKDT. . . . . . . .
Template Known Secondary structure  ...........................TSSGGGT






TTS



TTTTSB

S........
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   621........630.........640.........650.........660.....
 
   939940.........950.........960.........970.........980.........990.........1000.........1010........
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Query Sequence  AQGRPLIDTAIDASEVILALAPETNGHVAVKAWQALGEITGREHTHLALHKEDEKIRFRDIQAQPRKIISSPTWSGLESD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
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   10191020.........1030.........1040.........1050.........1060.........1070.........1080.........1090........
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Query Sequence  HVSYNAGYTNVHELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDTRSVSEMRQIPPNGFPEKALNFLTPHQKWGIH
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Template Sequence  . PDWGPRLNNQVCRKGLQTTTGKVEFIATSLKNFEEQGYIDEHRPSMHTYVPAWESQKHSPLAVKYPLGMLSPHPRFSMH
Template Known Secondary structure  .S


S
GGGSBTTBS
SSTTSSSB
TT


TTS
SB





TTSTTT
GGGGT





TTSBT
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   666...670.........680.........690.........700.........710.........720.........730.........740....
 
   10991100.........1110..... ....1120.........1130.........1140.........1150.........1160........
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Query Sequence  STYSENLLMLTLSRGGP. . . . . . . . . . IVWISETDARELTIVDNDWVEVFNANGALTARAVVSQRVPPGMTMMYHAQERI
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Template Sequence  TMG. DGKNSYMNYIKDHRVEVDGYKYWIMRVNSIDAEARGIKNGDLIRAYNDRGSVILAAQVTECLQPGTVHSYESCAVY
Template Known Secondary structure  TBS.SSTT
GGGGSTTTTTTT

TT
TTSSB
TT

S




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   745.. ..750.........760.........770.........780.........790.........800.........810.........820...
 
   11691170.........1180.........1190.........1200.........1210.........1220........
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Query Sequence  MNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGGYAQLAWGFNYYGTVGSNRDEFIMIRKMK
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Template Sequence  DPLGTAGKSADRGGCINILTPDR. YISKYACGM. . . . . . . . . . . . . . ANNTALVEIEKWD
Template Known Secondary structure 
BSSSTTTS
BSS

GGGSS

S.
SSSS



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BT


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   824.....830.........840...... ...850..... ....860........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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