Job Description P0A9C0 Confidence 99.39% Date Thu Jan 5 11:09:50 GMT 2012 Rank 76 Aligned Residues 347 % Identity 16% Template c3k7tB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:6-hydroxy-l-nicotine oxidase; PDBTitle: crystal structure of apo-form 6-hydroxy-l-nicotine oxidase,2 crystal form p3121 Resolution 2.85 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	A	I	V	V	G	G	G	F	S	G	L	K	A	A	R	D	L	T	N	A	G	K	K	V	L	L	L	E	G	G	E	R	L	G	G	R	A	Y	S	R	E	S	R	N	V	P	G	L	R	V	E	I	G	G	A	Y	L	H	R	K	H	H	P	R	L	A	A	E	L	D	R	Y	G	I	P	T	A	A
Template Known Secondary structure										B														T								S	S	S	S	S	B	T	T							S	S	S	S	S					S	S				B		T	T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
																												68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.													.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H	C	V	E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	S	F	Q	A	T	F	I	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	E	F	T	S	F	R	H	R	L	G	P	T	A	V	D	Q	A	F	P	I	P	G	S	E	A	V	A	V	E	A	A	T	Y	T	L	L	R	D	A	H	R	I	D	L	E	K	G	L	E	N	Q	D	L	E	D	L	D	I	P	L	N	E	Y	V	D	K	L	D	L	P	P	V	S	R	Q	F	L	L
Template Known Secondary structure											B	S		T	T	S		S	S	S	S				G	G	G																	T			T	T	T		T	T	S	S	S		T	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E	H	G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		A	W	A	W	N	M	L	G	Q	P	A	D	Q	A	S	A	L	W	M	L	Q	L	V	A	A	H	H	Y	S	I	L	G	V	V	L	S	L	D	E	V	F	S	N	G	S	A	D	L	V	D	A	M	S	Q	E	I	P	E	I	R	L	Q	T	V	V	T	G	I	D	Q	S	G	D	V	V	N	V	T	V	.
Template Known Secondary structure									S	S		T	T	T	S	B											T	T	S		S					T	T						S	S		T									T	T		S				S	S									S	S	S	S						.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	.	.	.	.	.	.	.	.	.	.	I	W	G	Q	H	I	A	E	Y	A	D	L	R	I	R	M	F	P	A	K	G	S	L	L	I	M	D	H	R	I	N	Q	H	V	I	N	R	C	R	K	P	S	D	A	D	I	L	V	P
Query Conservation																							.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	D	G	H	A	F	Q	A	H	S	V	I	V	A	T	P	M	N	T	W	R	R	I	V	F	T	P	A	L	P	E	R	R	R	S	V	I	E	E	G	H	G	G	Q	G	L	K	I	L	I	H	V	R	G	A	E	A	G	I	E	C	V	G	D	G	I	F	P	T	L	Y	D	Y	C	E
Template Known Secondary structure		.	.	.	.	.	S	S	S												S		G	G	G	T	T	T	S				S											T	T															S			T	T					B	S	S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	K	T	R	I	L	R	A	Y	S	G	V	R	P	L	V	A	S	D	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.																																															.	.	.
Template Conservation																							.	.	.	.	.	.	.																																															.	.	.
Template Sequence		V	S	E	S	E	R	L	L	V	A	F	T	D	S	G	S	F	D	P	T	D	.	.	.	.	.	.	.	I	G	A	V	K	D	A	V	L	Y	Y	L	P	E	V	E	V	L	G	I	D	Y	H	D	W	I	A	D	P	L	F	E	G	P	W	V	A	P	R	V	G	Q	F	S	R	V	.	.	.	H	K	E
Template Known Secondary structure			S	S	S										T	T	T			S	S		.	.	.	.	.	.	.										T	T		T	T											T	T	T		T	T	T	S		S	S					T	T					S	.	.	.	S	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.																																															.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.								.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.				.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.								.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		E	R	D	G	L	D	G	F	I	T	I	T	G	.	.	.	.	.	.	.	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	E	P	A	G	R	I	H	F	V	G	S	D	V	S	L	E	F	P	G	Y	I	E	G	A	L	E	T	A	E	C	A	V	N	A	I	L	H
Template Known Secondary structure		G	G	S			S	S					S	S	T	T		S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions