Phyre 2 alignment of P0A9C0 with c3gmbB

Job Description P0A9C0
Confidence 99.07% Date Thu Jan 5 11:09:50 GMT 2012

Rank 150 Aligned Residues 296

% Identity 14% Template c3gmbB_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-methyl-3-hydroxypyridine-5-carboxylic acid PDBTitle: crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic2 acid oxygenase

Resolution 2.10 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H	C	V	E
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	T	R	R	A	E	V	A	G	G	G	F	A	G	L	T	A	A	I	A	L	K	Q	N	G	W	D	V	R	L	H	E	K	S	S	E	L	R	A	F	G	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	Y	L	W	H	N	G	L	R	V	L	E	G	L	G	A	L	D	D	V	L	Q	G	S	H	T
Template Known Secondary structure										S													T	T								S	S	S	S					S	.	.	.	.	.	.	.	.	.	.	.	.	S															T	T							T	T		B
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50													.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

	88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E	H	G	A	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	P	P	T	Y	E	T	W	X	H	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	S	K	E	T	F	N	G	L	P	W	R	I	X	T	R	S	H	L	H	D	A	L	V	N	R	A	R	A	L	G	V	D
Template Known Secondary structure		S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G																							T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	79	80	.	.	.	.	.	.	.	.	.																																				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

	168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	L	R	I	R	M	F	P	A	K	G	S	L	L	I	M	D	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																				.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.																				.
Template Sequence	I	S	V	N	S	E	A	V	A	A	D	P	V	G	R	L	T	L	.	.	.	.	.	.	.	.	.	Q	T	G	E	V	L	E	A	D	L	I	V	G	A	D	G	V	G	S	.	K	V	R	D	S	I	G	F	K	Q	D	R	W	V	S	K	D	G	L	I	R	L	I	V	P	R	X	K	K	E	L	G	H
Template Known Secondary structure				S								T	T	T					.	.	.	.	.	.	.	.	.	S	S	S						S								T	T		.																S																	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																				.
Template SS confidence
	124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	H	R	I	N	Q	H	V	I	N	R	C	R	K	P	S	D	A	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	K	T	R	I	L	R	A	Y	S	G	V	R	P
Query Conservation	.
Alig confidence	.
Template Conservation
Template Sequence	G	E	W	D	N	T	I	D	X	W	N	F	W	P	R	V	Q	R	I	L	Y	S	P	C	N	E	N	E	L	Y	L	G	L	X	A	P	A	A	D	P	R	G	S	S	V	P	I	D	L	E	V	W	V	E	X	F	P	F	L	E	P	C	L	I	E	A	A	K	L	K	T	A	R	Y	D	K	Y	E	T	T
Template Known Secondary structure	S		T	T	S								S	S	S										S	S	S										T	T		T	T	T	T		S	S											G	G	G								T	T		T	T
Template Predicted Secondary structure
Template SS confidence
	194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

	317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	V	A	S	D	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R
Query Conservation
Alig confidence						.	.	.	.	.	.	.																		.	.	.	.
Template Conservation						.	.	.	.	.	.	.																		.	.	.	.
Template Sequence	K	L	D	S	W	.	.	.	.	.	.	.	T	R	G	K	V	A	L	V	G	D	A	A	H	A	X	C	P	.	.	.	.	A	L	A	Q	G	A	G	C	A	X	V	N	A	F	S	L	S	Q	D	L	E	E
Template Known Secondary structure			S		S	.	.	.	.	.	.	.			T	T					T								S	.	.	.	.	T	T	S																	T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
	274	.	.	.	.								.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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