Phyre 2 alignment of P0A9C0 with c3e1tA

Job Description P0A9C0
Confidence 99.62% Date Thu Jan 5 11:09:50 GMT 2012

Rank 41 Aligned Residues 321

% Identity 16% Template c3e1tA_

PDB info PDB header:flavoprotein Chain: A: PDB Molecule:halogenase; PDBTitle: structure and action of the myxobacterial chondrochloren2 halogenase cndh, a new variant of fad-dependent halogenases

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H	C	V
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	V	F	D	L	I	V	I	G	G	G	P	G	G	S	T	L	A	S	F	V	A	M	R	G	H	R	V	L	L	L	E	R	E	A	F	P	R	H	Q	I	G	E	.	.	.	.	.	.	.	.	.	.	.	.	S	L	L	P	A	T	V	H	G	I	C	A	M	L	G	L	T	D	E	M	K	R	A	G	F
Template Known Secondary structure											S												T	T	T								S	S		S	S				S			.	.	.	.	.	.	.	.	.	.	.	.	B							T	T					T	T							T	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.													.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

	87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E	H	G	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	P	I	K	R	G	G	T	F	R	W	G	K	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	W	T	F	G	F	T	R	H	P	D	D	P	Y	G	F	A	Y	Q	V	E	R	A	R	F	D	D	M	L	L	R	N	S	E	R	K	G	V
Template Known Secondary structure											S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S	S	S	S	S	S	S	T	T					B																	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	74	.	.	.	.	.	80	.	.	.	.	.	.	.																												.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.									.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.
Query Sequence	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	L	R	I	R	M	F	P	A	K	G	S	L	L	I	.	.	.	.	.	.	.	.	M	D	H
Query Conservation																																																																						.	.	.	.	.	.	.	.
Alig confidence																												.																				.																						.	.	.	.	.	.	.	.
Template Conservation																												.																				.
Template Sequence	D	V	R	E	R	H	E	V	I	D	V	L	F	E	G	E	R	A	V	G	V	R	Y	R	N	T	E	.	G	V	E	L	M	A	H	A	R	F	I	V	D	A	S	G	N	R	T	.	R	V	S	Q	A	V	G	E	R	V	Y	S	R	F	F	Q	N	V	A	L	Y	G	Y	F	E	N	G	K	R	L	P	A
Template Known Secondary structure				S	S										T	T										S	S	.	S																T	T		.	S	S	G	G	G	T							S	T	T											S					S	T
Template Predicted Secondary structure																												.																				.
Template SS confidence
	127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

	239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	I	N	Q	H	V	I	N	R	C	R	K	P	S	D	A	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	K	T	R	I	L	R	A	Y	S	G	V	R	P	L	V
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence	P	R	Q	G	N	I	L	S	A	A	F	Q	D	G	W	F	W	Y	I	P	L	S	D	T	L	T	S	V	G	A	V	V	S	R	E	A	.	.	A	E	A	I	K	D	G	H	E	A	A	L	L	R	Y	I	D	R	C	P	I	I	K	E	Y	L	A	P	A	T	R	V	T	T	G	D	Y	G	E	I	R	I
Template Known Secondary structure	T		T	T	S							T	T									S	S	S													.	.		T	T	T	S	S												T	S								T	T						S	S	T	T	S	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
	205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

	319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	S	D	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R	K	L
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence	R	K	D	Y	S	Y	C	N	T	S	F	W	K	N	G	M	A	L	V	G	D	A	A	C	F	V	D	P	.	.	.	V	F	S	S	G	V	H	L	A	T	Y	S	A	L	L	V	A	R	A	I	N	T	C	L
Template Known Secondary structure			S						S		S	B		S	S					G	G	G	T					S	.	.	.	T	T																						T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
	283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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