Job Description P0A9C0 Confidence 100.00% Date Thu Jan 5 11:09:50 GMT 2012 Rank 6 Aligned Residues 352 % Identity 19% Template c3dmeB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from2 bordetella pertussis. northeast structural genomics target3 ber141 Resolution 1.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																				.																								.	.
Query SS confidence																																				.																								.	.
Query Sequence		Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	.	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	.	.	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R
Query Conservation																																				.																								.	.
Alig confidence																																				.																								.	.
Template Conservation
Template Sequence		T	D	I	D	C	I	V	I	G	A	G	V	V	G	L	A	I	A	R	A	L	A	A	G	G	H	E	V	L	V	A	E	A	A	E	G	I	G	T	G	T	S	S	R	N	S	E	V	I	H	A	G	I	Y	Y	P	A	D	S	L	K	A	R	L	C	V	R	G	K	H	L	L	Y	E	Y	C	A	A	R	G
Template Known Secondary structure												S													T	T								S	S	S	S	T	T		S	G	G	G	S	S									S	S		T	T																						T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	V	E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	H	Q	R	L	G	K	L	I	V	A	T	S	D	A	E	A	S	Q	L	D	S	I	A	R	R	A	G	A	N	G	V	D	D	L	Q	H	I	D	G	A	A	A	R	R	L	E	P	A	L	H	C	T	A	A	L	V	S	P	S	T	G	I	V	D	S	H	A	L	M	L	A	Y	Q	G	D	A	E	S
Template Known Secondary structure															S					T	T											T	T																	T	T				S						T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		H	G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	L	R	.	.	.	.	.	I	R	M	F	P	A	K	G	S	L	L	I	M	D	H
Query Conservation																																																														.	.	.	.	.
Alig confidence																													.	.	.																															.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		D	G	A	Q	L	V	F	H	T	P	L	I	A	G	R	V	R	P	E	G	G	F	E	L	D	F	G	.	.	.	G	A	E	P	M	T	L	S	C	R	V	L	I	N	A	A	G	L	H	A	P	G	L	A	R	R	I	E	G	I	P	R	D	S	I	P	P	E	Y	L	C	K	G	S	Y	F	T	L	A	G
Template Known Secondary structure		T	T						S										T	T	S	S							.	.	.	S	S	S														G	G	G							T			T	S		G	G	G	S															S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		R	I	N	Q	H	V	I	N	R	C	R	K	P	S	D	A	.	.	.	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	K	T	R	I	L	R	A	Y	S	G	V	R
Query Conservation																		.	.	.
Alig confidence																		.	.	.																					.	.	.
Template Conservation																																									.	.	.
Template Sequence		R	A	P	F	S	R	L	I	Y	P	V	P	Q	H	A	G	L	G	V	H	L	T	L	D	L	G	G	Q	A	K	F	G	P	D	T	E	W	I	A	.	.	.	T	E	D	Y	T	L	D	P	R	R	A	D	V	F	Y	A	A	V	R	S	Y	W	P	A	L	P	D	G	A	L	A	P	G	Y	T	G	I	R
Template Known Secondary structure		S		S		S	S						T	T		S	S									T	T	S												S	.	.	.	S							G	G	G	G	T	T							T	T		T	T			T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		P	L	V	A	S	D	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	.	.	.	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C
Query Conservation																																								.	.	.
Alig confidence														.	.	.	.	.	.																					.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		P	K	I	S	G	P	H	E	P	A	A	D	.	.	.	.	.	.	F	A	I	A	G	P	A	S	H	G	V	A	G	L	V	N	L	Y	G	I	E	S	P	G	L	T	A	S	L	A	I	A	E	E	T	L	A	R	L	A
Template Known Secondary structure				S	S		T	T	S					.	.	.	.	.	.												T	T									T	T
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.							.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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