Job Description P0A9C0 Confidence 100.00% Date Thu Jan 5 11:09:50 GMT 2012 Rank 3 Aligned Residues 456 % Identity 28% Template c3da1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: x-ray structure of the glycerol-3-phosphate dehydrogenase2 from bacillus halodurans complexed with fad. northeast3 structural genomics consortium target bhr167. Resolution 2.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H	C
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	Q	L	D	L	L	V	I	G	G	G	I	T	G	A	G	I	A	L	D	A	Q	V	R	G	I	Q	T	G	L	V	E	X	N	D	F	A	S	G	T	S	S	R	S	T	K	L	V	H	G	V	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	A	I	V	Y	E	N	A	P	H	V
Template Known Secondary structure		T	S										S												T	T	T								S	S	S	T	T		S	G	G	G	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.															70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		V	E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	.	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E	H
Query Conservation																																																					.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	P	E	W	X	L	L	P	I	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	X	L	N	E	K	Q	T	L	E	K	E	P	L	L	R	K	E	N	L	K	G	G	G	I	Y	V	E	Y	R	T	D	D	A	R	L	T	L	E	I	X	K	E	A	V	A	R
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	S			T	T																												T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.																					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																															.	.																	.
Query SS confidence																																																															.	.																	.
Query Sequence		G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	L	R	I	R	.	.	M	F	P	A	K	G	S	L	L	I	M	D	H	R	I	N	.
Query Conservation																																																															.	.																	.
Alig confidence																																																															.	.																	.
Template Conservation
Template Sequence		G	A	V	A	L	N	Y	X	K	V	E	S	F	I	Y	D	Q	G	K	V	V	G	V	V	A	K	D	R	L	T	D	T	T	H	T	I	Y	A	K	K	V	V	N	A	A	G	P	W	V	D	T	L	R	E	K	D	R	S	K	H	G	K	Y	L	K	L	S	K	G	V	H	L	V	V	D	Q	S	R	F	P
Template Known Secondary structure		T						S										T	T										T	T	T																G	G	G							T	T	T				S	S														G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
				242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																													.	.
Query SS confidence		.	.																																																													.	.
Query Sequence		.	.	Q	H	V	I	N	R	C	R	K	P	S	D	A	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	.	.	M	A	K	T	R	I	L	R	A	Y	S	G	V	R	P	L
Query Conservation		.	.																																																													.	.
Alig confidence		.	.																																		.																											.	.
Template Conservation																																					.
Template Sequence		L	R	Q	A	V	Y	F	D	T	E	S	D	G	R	X	I	F	A	I	P	R	E	G	K	T	Y	I	G	T	T	D	T	F	Y	D	.	K	D	I	A	S	P	R	X	T	V	E	D	R	D	Y	I	L	A	A	A	N	Y	X	F	P	S	L	R	L	T	A	D	D	V	E	S	S	W	A	G	L	R	P	L
Template Known Secondary structure			S	S							S	S	S										T	T													.	S		T	T																					T	T					T	T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		V	A	S	D	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R	K	L	G	N	T	R	P	C	T	T	A	D	L	A	L	P	G	S	Q	E	P	A	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	D	E	I	F	F	S	D	S	G	L	I	S	I	A	G	G	K	L	T	G	Y	R	K	X	A	E	R	T	V	D	A	V	A	Q	G	L	N	V	N	E	P	C	T	T	A	A	I	R	L	S	G	G	L	A	E	G	A	Q	G	F
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S										S	T	T																	T							T	T	S				T	T			T	T		S	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		343																		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
								394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																.	.																																			.
Query SS confidence		.	.	.	.	.	.																																.	.																																			.
Query Sequence		.	.	.	.	.	.	E	V	T	L	R	K	V	I	S	L	P	A	P	L	R	G	S	A	V	Y	R	H	G	D	R	T	P	A	W	L	S	.	.	E	G	R	L	H	R	S	L	V	C	E	C	E	A	V	T	A	G	E	V	Q	Y	A	V	E	N	L	N	V	N	S	L	L	D	.	L	R	R	R	T	R
Query Conservation		.	.	.	.	.	.																																.	.																																			.
Alig confidence		.	.	.	.	.	.																																.	.																																			.
Template Conservation
Template Sequence		P	R	F	L	D	E	A	S	R	K	G	A	K	L	G	F	D	A	D	E	V	R	R	L	A	K	L	Y	G	S	N	V	D	H	V	L	N	Y	A	Y	E	G	K	E	E	A	E	H	Y	G	L	P	A	L	L	L	G	Q	L	Q	Y	G	V	E	Q	E	X	V	A	T	P	L	D	F	F	V	R	R	T	G
Template Known Secondary structure														T	T	T														G	G	G											T							T	T	S															S				S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		465	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		V	G	.	M	G	T	C	Q	G	E	L	C	A	C	R	A	A	G	L	L	Q	R	F	N	V	T	T	S	A	Q	S	I	E	Q	L	S	T	F	L	N	E	R	W	K	G	V	Q	P	I	A
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		A	L	F	F	N	I	S	L	V	H	Q	W	K	E	A	V	L	R	W	X	A	E	E	F	S	W	T	E	E	E	K	T	R	F	Q	N	E	L	E	T	E	L	K	X	A	V	D	P	L	F
Template Known Secondary structure																									T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.