Job Description P0A9C0 Confidence 99.72% Date Thu Jan 5 11:09:50 GMT 2012 Rank 33 Aligned Residues 310 % Identity 18% Template c3atrA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:conserved archaeal protein; PDBTitle: geranylgeranyl reductase (ggr) from sulfolobus acidocaldarius co-2 crystallized with its ligand Resolution 1.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H	C	V
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	Y	D	V	L	I	I	G	G	G	F	A	G	S	S	A	A	Y	Q	L	S	R	R	G	L	K	I	L	L	V	D	S	K	P	W	N	R	I	G	D	K	P	C	G	D	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	A	H	F	D	K	L	G	M	P	Y	P	K	G	E	E	L	E
Template Known Secondary structure					S							S											S	S	S	S								S	S		G	G	G	T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.								T	T						G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.														.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E	H	G	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	I	N	G	I	K	L	Y	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	Q	T	V	W	T	V	N	G	E	G	F	E	L	N	A	P	L	Y	N	Q	R	V	L	K	E	A	Q	D	R	G	V
Template Known Secondary structure												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S																												T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.																																					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.										.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.
Query Sequence		V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	L	R	I	R	M	F	P	A	K	G	.	.	.	.	.	.	.	.	.	S	L	L	I	M	D
Query Conservation																																																																			.	.	.	.	.	.	.	.	.
Alig confidence																																																	.																		.	.	.	.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		E	I	W	D	L	T	T	A	M	K	P	I	F	E	D	G	Y	V	K	G	A	V	L	F	N	R	R	T	N	E	E	L	T	V	Y	S	K	V	V	V	E	A	T	G	Y	S	R	.	S	F	R	S	K	L	P	P	E	L	P	I	T	E	D	L	D	D	K	D	A	D	V	A	Y	R	E	V	L	L	T	K
Template Known Secondary structure					S	S										T	T										T	T	T	T								S							G	G	G		.	T	T	G	G	G	S		T	T	S	G	G	G					G	G	G												S
Template Predicted Secondary structure																																																	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		H	R	I	N	Q	H	V	I	N	R	C	R	K	P	S	D	A	D	.	.	.	.	.	.	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	K	T	R	I	L	R	A	Y
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.
Template Sequence		E	D	I	E	D	H	D	Y	L	R	I	F	I	D	Q	E	T	S	P	G	G	Y	W	W	Y	F	P	K	G	K	N	K	V	N	V	G	L	G	I	Q	G	G	M	G	Y	P	S	.	.	.	.	.	.	.	.	I	H	E	Y	Y	K	K	Y	L	D	K	Y	A	P	D	V	D	K	S	K	L	L	V	K	G
Template Known Secondary structure		S			T	T	T	T								T	T	T	S	T	T	S									T	T										S	S	S					.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	R	P	L	V	A	S	D	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R	K	L	G	N	T	R	P	C	T	T	A
Query Conservation
Alig confidence										.	.	.	.																							.	.	.	.
Template Conservation										.	.	.	.																							.	.	.	.
Template Sequence		G	A	L	V	P	T	R	R	.	.	.	.	P	L	Y	T	M	A	W	N	G	I	I	V	I	G	D	S	G	F	T	V	N	P	.	.	.	.	V	H	G	G	G	K	G	S	A	M	I	S	G	Y	C	A	A	K	A	I	L	S	A	F	E	T	G	D	F	S	A	S	G
Template Known Secondary structure								S	S	.	.	.	.			S		S			T	T					G	G	G	G	T		S		T	.	.	.	.	T	T																									T			S	T	T	T
Template Predicted Secondary structure										.	.	.	.																							.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions