Job Description P0A9C0 Confidence 100.00% Date Thu Jan 5 11:09:50 GMT 2012 Rank 1 Aligned Residues 495 % Identity 24% Template c2rgoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		S	Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	.	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		Q	E	E	L	D	L	L	I	I	G	G	G	I	T	G	A	G	V	A	V	Q	A	A	A	S	G	I	K	T	G	L	I	E	M	Q	D	F	A	E	G	T	S	S	R	S	T	K	L	V	H	G	G	I	R	Y	L	K	T	F	D	V	E	V	V	A	D	T	V	G	E	R	A	V	V	Q	G	I	A	P	H
Template Known Secondary structure			S										S												T	T	T								S	S	S	T	T		S	G	G	G	S	S		S						G	G	G	G	G	G	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.												.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																																.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.																																																.
Query Sequence		C	V	E	P	T	N	G	L	F	I	T	L	P	.	.	.	.	.	.	.	.	.	.	.	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	.	D	G	T	V	D	P	F	R
Query Conservation															.	.	.	.	.	.	.	.	.	.	.																																																.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation
Template Sequence		I	P	K	P	D	P	M	L	L	P	I	Y	E	D	E	G	A	T	T	F	N	M	F	S	V	K	V	A	M	D	L	Y	D	K	L	A	N	V	T	G	T	K	Y	E	N	Y	T	L	T	P	E	E	V	L	E	R	E	P	F	L	K	K	E	G	L	K	G	A	G	V	Y	L	D	F	R	N	N	D	A	R
Template Known Secondary structure		S	S											S	S	S	S	S		S																	T	T		T	T	S	T	T															T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		L	T	A	A	N	M	L	D	A	K	E	H	G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	.	.	.	L	R	I	R	M	F	P	A
Query Conservation																																																																							.	.	.
Alig confidence																																																																							.	.	.
Template Conservation
Template Sequence		L	V	I	D	N	I	K	K	A	A	E	D	G	A	Y	L	V	S	K	M	K	A	V	G	F	L	Y	E	G	D	Q	I	V	G	V	K	A	R	D	L	L	T	D	E	V	I	E	I	K	A	K	L	V	I	N	T	S	G	P	W	V	D	K	V	R	N	L	N	F	T	R	P	V	S	P	K	M	R	P	T
Template Known Secondary structure													T	T						S									S	S	S	S									T	T	T	T															G	G	G						T	T		T	T	S						B
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																							.	.	.	.																																																						.	.
Query SS confidence																							.	.	.	.																																																						.	.
Query Sequence		K	G	S	L	L	I	M	D	H	R	I	N	Q	H	V	I	N	R	C	R	K	.	.	.	.	P	S	D	A	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	.	.
Query Conservation																							.	.	.	.																																																						.	.
Alig confidence																							.	.	.	.																									.																													.	.
Template Conservation																																																			.
Template Sequence		K	G	I	H	L	V	V	D	A	K	K	L	P	V	P	Q	P	T	Y	F	D	T	G	K	Q	D	G	R	M	V	F	A	I	P	R	E	N	K	T	Y	F	G	T	T	D	T	D	Y	Q	.	G	D	F	T	D	P	K	V	T	Q	E	D	V	D	Y	L	L	D	V	I	N	H	R	Y	P	E	A	N	I	T
Template Known Secondary structure										G	G	G	S			S	S							S	S	S	S	S									T	T													.	S		S	S	S																			S	T	T	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																							.	.																																																					.	.	.	.	.
Query SS confidence																							.	.																																																					.	.	.	.	.
Query Sequence		K	T	R	I	L	R	A	Y	S	G	V	R	P	L	V	A	S	D	D	D	P	.	.	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R	K	L	G	N	T	.	.	.	.	.
Query Conservation																							.	.																																																					.	.	.	.	.
Alig confidence																							.	.																.	.	.	.	.																																	.	.	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		L	A	D	I	E	A	S	W	A	G	L	R	P	L	L	I	G	N	S	G	S	D	Y	N	G	G	T	I	S	R	G	S	S	L	E	R	E	P	.	.	.	.	.	D	G	L	L	T	L	S	G	G	K	I	T	D	Y	R	K	M	A	E	G	A	L	R	L	I	R	Q	L	L	K	E	E	Y	G	I	E	T
Template Known Secondary structure		G	G	G												B	T	T			G	G	G	G	T	T				S	T	T							T	.	.	.	.	.	T	S									G	G	G
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.						.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.										.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		R	P	C	T	T	A	D	L	A	L	P	G	S	Q	E	P	A	E	V	T	L	R	K	V	I	S	.	.	.	.	.	.	.	.	.	L	P	A	P	L	R	G	S	A	V	Y	R	H	G	D	R	T	P	A	W	L	S	E	G	R	L	H	R	S	L	V	C	E	C	E	A	V	T	A	G	E	V	Q	Y	A
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																																																																.	.
Template Sequence		K	E	I	D	S	K	K	Y	Q	I	S	G	G	N	F	D	P	T	K	L	E	E	T	V	T	E	L	A	K	E	G	V	A	A	G	L	E	E	E	D	A	T	Y	I	A	D	F	Y	G	T	N	A	R	R	I	F	E	L	A	K	E	A	.	.	P	Y	P	G	L	S	L	A	E	S	A	R	L	R	Y	G
Template Known Secondary structure						T	T	T				T	T			S		T	T															T	T	T														G	G	G												.	.			T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.			.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.				500	.	.	.	.					.	.	.	.
Predicted Secondary structure													.										.																																	.	.	.						.	.	.	.
Query SS confidence													.										.																																	.	.	.						.	.	.	.
Query Sequence		V	E	N	L	N	V	N	S	L	L	D	.	L	R	R	R	T	R	V	G	M	.	G	T	C	Q	G	E	L	C	A	C	R	A	A	G	L	L	Q	R	F	N	V	T	T	S	A	Q	S	I	E	Q	L	S	.	.	.	T	F	L	N	E	.	.	.	.	R	W	K	G
Query Conservation													.										.																																	.	.	.						.	.	.	.
Alig confidence													.										.																																	.	.	.						.	.	.	.
Template Conservation
Template Sequence		L	E	E	E	M	V	L	A	P	G	D	Y	L	I	R	R	T	N	H	L	L	F	E	R	D	Q	L	D	E	I	K	Q	P	V	I	D	A	I	A	E	Y	F	G	W	T	E	E	E	K	A	Q	Q	T	K	R	L	E	A	L	I	A	E	S	D	L	R	E	L	K	G
Template Known Secondary structure					S				S							T	T	S	S						G	G	G																	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.