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Job DescriptionP0A9C0
Confidence100.00%DateThu Jan 5 11:09:50 GMT 2012
Rank11Aligned Residues350
% Identity16%Templatec2olnA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nikd protein; PDBTitle: nikd, an unusual amino acid oxidase essential for2 nikkomycin biosynthesis: closed form at 1.15 a resolution
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.... .....50.........60.........70.........80....
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Query Sequence  QSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT. . GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARH
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Template Sequence  ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERR
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STT

SS
TT
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SS
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SST

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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   85....90.........100... ......110.........120.........130.... .....140.........150.........160
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Query Sequence  CVEPTNGLFITLPEDDLSF. . QATFIRACEEAGISAEAIDPQQARIIEPAVN. . PALIGAVKVPDGTVDPFRLTAANMLD
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Template Sequence  LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTL
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SS

BTTB
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRI
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Template Sequence  AQAAGATLRAGETVTELVPDADGVSVT. . . . . . . TDRGTYRAGKVVLACGPYTNDLLEPLGARLAYSVYEMAIAAYRQAT
Template Known Secondary structure  TT
S

TT.......SS


GGGGGGT



B
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   163......170.........180......... 190.........200.........210.........220.........230.....
 
   241........250.... .....260.........270........ .280.........290.........300......
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Query Sequence  NQHVINRCRKPSDA. . . . . . . . . . . DILVPGDTISLIGTTSLRIDYNEI. . . DDNRVTAEEVDILLREGEKLAPVMAKTR
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Template Sequence  PVTEAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATGVADRRQMDRLSGWLRDHLPTVDPDP
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SSS






SSSSSS



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SSGGG

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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   307 ..310.........320.........330.........340.........350.........360.........370.
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Query Sequence  I. LRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCR
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Template Sequence  VRTSTCLAVLPTDPERQFFLGTAR. . . . . . . . DLMTHGEKLVVYGAGWAFKFVPLFGRICADLAVE
Template Known Secondary structure  SSSTT


ST........TTSTTGGGSS
GGG
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   316...320.........330......... 340.........350.........360.........370...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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