Job Description P0A9C0 Confidence 100.00% Date Thu Jan 5 11:09:50 GMT 2012 Rank 7 Aligned Residues 344 % Identity 19% Template c2gahB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:heterotetrameric sarcosine oxidase beta-subunit; PDBTitle: heterotetrameric sarcosine: structure of a diflavin2 metaloenzyme at 1.85 a resolution Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	.	.	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H
Query Conservation																											.	.
Alig confidence																											.	.																															.
Template Conservation																																																											.
Template Sequence		K	S	Y	D	A	I	I	V	G	G	G	G	H	G	L	A	T	A	Y	F	L	A	K	N	H	G	I	T	N	V	A	V	L	E	K	G	W	L	A	G	G	N	X	A	R	N	T	T	I	I	R	S	N	Y	L	W	D	.	E	S	A	G	I	Y	E	K	S	L	K	L	W	E	Q	L	P	E	D	L	E	Y
Template Known Secondary structure		S										S																								S	S	S	T	T		S	G	G	G	T	S				B					S	S		.																				T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		85			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure			.	.																																																						.	.	.	.	.	.	.
Query SS confidence			.	.																																																						.	.	.	.	.	.	.
Query Sequence		C	.	.	V	E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	.	.	.	.	.	.	.	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A
Query Conservation			.	.																																																						.	.	.	.	.	.	.
Alig confidence			.	.																																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	L	F	S	Q	R	G	V	L	N	L	A	H	T	L	G	D	V	R	E	S	V	R	R	V	E	A	N	K	L	N	G	V	D	A	E	W	L	D	P	S	Q	V	K	E	A	C	P	I	I	N	T	S	D	D	I	R	Y	P	V	X	G	A	T	W	Q	P	R	A	G	I	A	K	H	D	H	V	A	W
Template Known Secondary structure						B										S																T	T	T																T	T	S			S	S		S	S	S									T	T		B	B
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	M	L	D	A	K	E	H	G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	L	R	I	R	M	F	P	A	K	G	S	L	L	I
Query Conservation
Alig confidence																																			.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		A	F	A	R	K	A	N	E	X	G	V	D	I	I	Q	N	C	E	V	T	G	F	I	K	D	G	E	K	V	T	G	V	K	.	.	.	.	.	.	T	T	R	G	T	I	H	A	G	K	V	A	L	A	G	A	G	H	S	S	V	L	A	E	X	A	G	F	E	L	P	I	Q	S	H	P	L	Q	A	L	V
Template Known Secondary structure										T	T						S									S	S	S	B						.	.	.	.	.	.		T	T													G	G	G									T
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	H	R	I	N	Q	H	V	I	N	R	C	R	K	P	S	D	A	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	K	T	R	I	L	R	A	Y	S	G	V	R
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence		S	E	L	F	E	P	V	H	P	T	V	V	X	S	N	H	I	H	V	Y	V	S	Q	A	H	K	G	E	L	V	X	G	A	G	I	D	S	Y	N	.	.	.	G	Y	G	Q	R	G	A	F	H	V	I	Q	E	Q	X	A	A	A	V	E	L	F	P	I	F	A	R	A	H	V	L	R	T	W	G	G	I	V
Template Known Secondary structure						S	S				S					T	T	T	T							T	T	S										S	S		.	.	.			S	S				T															G	G	G	T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	V	A	S	D	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	T	X	D	A	.	.	.	.	.	.	.	.	.	.	.	S	P	I	I	S	K	T	P	I	Q	N	L	Y	V	N	C	G	W	G	T	G	G	F	K	G	T	P	G	A	G	F	T	L	A	H	T	I	A	N
Template Known Secondary structure					T	T	S	.	.	.	.	.	.	.	.	.	.	.								S	S	B	T							B	T	T			S	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.												.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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