Job Description P0A9C0 Confidence 98.90% Date Thu Jan 5 11:09:50 GMT 2012 Rank 185 Aligned Residues 191 % Identity 16% Template c2cduB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadph oxidase; PDBTitle: the crystal structure of water-forming nad(p)h oxidase from2 lactobacillus sanfranciscensis Resolution 1.8 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		M	K	T	R	D	S	Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	.	.	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L
Query Conservation																																.	.
Alig confidence				.	.	.	.	.	.	.	.																					.	.																																		.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template Sequence		M	K	.	.	.	.	.	.	.	.	V	I	V	V	G	C	T	H	A	G	T	F	A	V	K	Q	T	I	A	D	H	P	D	A	D	V	T	A	Y	E	M	N	D	N	I	S	F	L	S	G	I	A	L	Y	L	G	K	E	I	K	N	N	D	P	R	.	.	.	.	.	G	L	F	Y	S	S	P	E	E	L
Template Known Secondary structure				.	.	.	.	.	.	.	.							S															T	T								S	S	S			S	B									T	T		S	G	G	G		G	G	.	.	.	.	.	G	G	B	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template SS confidence
		1	.									.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																																																	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	I	A	R	H	C	V	E	P	T	N	G	L	F	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	L	G	A	N	V	Q	M	R	H	Q	V	T	N	V	D	P	E	T	K	T	I	K	V	K	D	L	I	T	N	E	E	K	T	E	A	Y	D	K	L	I	M	T	T	G	S	K	P	T	V	P	P	I	P	G	I	D	S	S	R	V	Y	L	C	K	N	Y	N	D	A	K	K	L	F	E	E	A	P	K
Template Known Secondary structure				T	T						S								G	G	G	T							T	T	T									S														S		T	T	T	T	S	T	T					S	S											G	G	G
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	.	.	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E	H	G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R
Query Conservation																																								.	.
Alig confidence																																								.	.
Template Conservation
Template Sequence		A	K	T	I	T	I	I	G	S	G	Y	I	G	A	E	L	A	E	A	Y	S	N	Q	N	Y	N	V	N	L	I	D	G	H	E	R	V	L	Y	K	Y	F	D	K	E	F	T	D	I	L	A	K	D	Y	E	A	H	G	V	N	L	V	L	G	S	K	V	A	A	F	E	E	V	D	D	E	I	I	T	K	T
Template Known Secondary structure			S								S												T	T	T								S	S	S	S	T	T	T	T	T	S															T	T						S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	D	G	K	E	I	K	S	D	I	A	I	L	C	I	G
Template Known Secondary structure		.	.	.	.	.	.	T	T	S						S						S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions