Job Description P0A9C0 Confidence 100.00% Date Thu Jan 5 11:09:50 GMT 2012 Rank 8 Aligned Residues 345 % Identity 21% Template c1y56B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sarcosine oxidase; PDBTitle: crystal structure of l-proline dehydrogenase from p.horikoshii Resolution 2.86 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H	C	V
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		E	K	S	E	I	V	V	I	G	G	G	I	V	G	V	T	I	A	H	E	L	A	K	R	G	E	E	V	T	V	I	E	K	R	F	I	G	S	G	S	T	F	R	C	G	T	G	I	R	Q	Q	F	N	.	D	E	A	N	V	R	V	M	K	R	S	V	E	L	W	K	K	Y	S	E	E	Y	G	F	S	F
Template Known Secondary structure		S	B		S							S													T	T								S	S	S	T	T		S														S	.	S																						T
Template Predicted Secondary structure																																																							.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	.	.	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E	H
Query Conservation																																																		.	.
Alig confidence																																																		.	.
Template Conservation
Template Sequence		K	Q	T	G	Y	L	F	L	L	Y	D	D	E	E	V	K	T	F	K	R	N	I	E	I	Q	N	K	F	G	V	P	T	K	L	I	T	P	E	E	A	K	E	I	V	P	L	L	D	I	S	E	V	I	A	A	S	W	N	P	T	D	G	K	A	D	P	F	E	A	T	T	A	F	A	V	K	A	K	E	Y
Template Known Secondary structure												S																	T	T														S	S	T	T				T	T								T	T																				T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																											.	.																					.
Query SS confidence																																																											.	.																					.
Query Sequence		G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	.	.	L	R	I	R	M	F	P	A	K	G	S	L	L	I	M	D	H	R	I	N	.
Query Conservation																																																											.	.																					.
Alig confidence																										.	.	.	.	.	.																												.	.																					.
Template Conservation																										.	.	.	.	.	.
Template Sequence		G	A	K	L	L	E	Y	T	E	V	K	G	F	L	I	E	N	N	E	I	K	G	V	K	.	.	.	.	.	.	T	N	K	G	I	I	K	T	G	I	V	V	N	A	T	N	A	W	A	N	L	I	N	A	M	A	G	I	K	T	K	I	P	I	E	P	Y	K	H	Q	A	V	I	T	Q	P	I	K	R	G
Template Known Secondary structure		T						S									S	S	S	B						.	.	.	.	.	.		T	T						S							G	G	G									T			S																		S	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
			242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Q	H	V	I	N	R	C	R	K	P	S	D	A	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	K	T	R	I	L	R	A	Y	S	G	V	R	P	L	V	A	S
Query Conservation		.
Alig confidence		.																													.	.	.
Template Conservation																															.	.	.
Template Sequence		T	I	N	P	M	V	I	S	F	K	Y	G	H	A	Y	L	T	Q	T	F	H	G	G	I	I	G	G	I	G	.	.	.	Y	E	I	G	P	T	Y	D	L	T	P	T	Y	E	F	L	R	E	V	S	Y	Y	F	T	K	I	I	P	A	L	K	N	L	L	I	L	R	T	W	A	G	Y	Y	A	K	T	P	D
Template Known Secondary structure		S	S		S					S	T	T	T	T							S	S	S							S	.	.	.			B	S	S																							G	G	G	G	G	S														T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	.	.	.	.	.	.	.	.	.	.	P	A	I	G	R	I	E	E	L	N	D	Y	Y	I	A	A	G	F	S	G	H	G	F	M	M	A	P	A	V	G	E	M	V	A	E	L	I	T	K
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.							S	S	S	B	T								T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.											.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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