Job Description P0A9C0 Confidence 99.96% Date Thu Jan 5 11:09:50 GMT 2012 Rank 18 Aligned Residues 327 % Identity 15% Template c1kifE_ PDB info PDB header:flavoprotein Chain: E: PDB Molecule:d-amino acid oxidase; PDBTitle: d-amino acid oxidase from pig kidney Resolution 2.60 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	.	.	.	.	.	.	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																					.
Template Conservation																																																									.
Template Sequence		V	V	V	I	G	A	G	V	I	G	L	S	T	A	L	C	I	H	E	R	Y	H	S	V	L	Q	P	L	D	V	K	V	Y	A	D	R	F	T	P	F	T	T	T	D	V	A	A	G	L	W	Q	P	Y	T	S	.	E	P	S	N	P	Q	E	A	N	W	N	Q	Q	T	F	N	Y	L	L	S	H	I	G	S
Template Known Secondary structure								S															T	T	T	S	S	S								S			T	T	S	S	S	G	G	G	S			B					S	S	.			S	S	T															T	T	T	T	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L	D	A	K	E	H
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		P	N	A	A	N	M	G	L	T	P	V	S	G	Y	N	L	F	R	E	A	.	.	.	.	.	.	V	P	D	P	Y	W	K	D	M	V	L	G	F	R	K	L	T	P	R	E	L	D	M	F	P	D	Y	R	Y	G	W	F	N	T	S	L	I	L	E	G	R	K	Y	L	Q	W	L	T	E	R	L	T	E	R
Template Known Secondary structure		T	T	T	T	T	T	T											S	S		.	.	.	.	.	.					T	T	T	T	T	S												T	T	S	T	T																												T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	L	R	I	R	M	F	P	A	K	G	S	L	L	I	M	D	H	R	I	N	Q	H	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Sequence		G	V	K	F	F	L	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	S	F	E	E	V	A	R	G	G	A	D	V	I	I	N	C	T	G	V	W	A	G	V	L	.	.	.	.	Q	P	D	P	L	L	Q	P	G	R	G	Q	I	I	K	V	D	A	P	W	L	K	N	F
Template Known Secondary structure		T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S							G	G	G					.	.	.	.	S			T	T														T	T			S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.																			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		245	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		I	N	R	C	R	K	P	.	.	.	S	D	A	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	M	A	K	T	R	I	L	R	A	Y	S	G	V	R	P	L	V	A	S	D
Query Conservation									.	.	.
Alig confidence									.	.	.																								.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		I	I	T	H	D	L	E	R	G	I	Y	N	S	P	Y	I	I	P	G	L	Q	A	V	T	L	G	G	T	F	Q	V	G	N	.	.	.	.	W	N	E	I	N	N	I	Q	D	H	N	T	I	W	E	G	C	C	R	L	E	P	T	L	K	D	A	K	I	V	G	E	Y	T	G	F	R	P	V	R	P	Q	V
Template Known Secondary structure							T	T	T		T	T		S							S	S	S										T		.	.	.	.				S																	S	G	G	G	G	G															S	S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R	K	L	G	N	T	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	L	E	R	E	Q	L	R	F	G	S	S	N	T	E	V	I	H	N	Y	G	H	G	G	Y	G	L	T	I	H	W	G	C	A	L	E	V	A	K	L	F	G	K	V	L	E	E	R	N
Template Known Secondary structure		.	.	.	.	.	.	.									S	S	S												G	G	G																							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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