Job Description P0A9C0 Confidence 99.30% Date Thu Jan 5 11:09:50 GMT 2012 Rank 100 Aligned Residues 202 % Identity 15% Template c1gndA_ PDB info PDB header:gtpase activation Chain: A: PDB Molecule:guanine nucleotide dissociation inhibitor; PDBTitle: guanine nucleotide dissociation inhibitor, alpha-isoform Resolution 1.81 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	.	.	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	T	D	A	E	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	Y	D	V	I	V	L	G	T	G	L	T	E	C	I	L	S	G	I	M	S	V	N	G	K	K	V	L	H	M	D	R	N	P	Y	Y	G	G	E	S	S	S	I	T	P	L	E	E	L	Y	K	R	F	Q	L	L	E	G	P	P	E	T	M	G	R	G	R	D	W	N	V	D	L	I	P	K	F	L	M
Template Known Secondary structure		S	B		S							S													T	T								S	S	S	S	S		T	T	S					S								T	T			S				G	G	G			G	G	G					S	S			B
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																																																									69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	C	I	S	E	N	Q	I	L	K	R	I	A	R	H	C	V	E	P	T	N	G	L	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	G	Q	L	V	K	M	L	L	Y	T	E	V	T	R	Y	L	D	F	K	V	V	E	G	S	F	V	Y	K	G	G	K	I	Y	K	V	P	S	T	E	T	E	A	L	A	S	N	L	M	G	M	F	E	K	R	R	F	R	K	F	L	V	F	V	A	N	F	D	E	N	D	P	K	T	F	E	G	V	D
Template Known Secondary structure		T	T	S										T	G	G	G	S														T	T								S								S	S	S																				T	T		G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		94	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Query Sequence		I	T	L	P	E	D	D	L	.	.	.	.	.	.	.	.	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	.	.	.	.	.	.	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T	A	A	N	M	L
Query Conservation										.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																							.	.	.	.	.	.																											.	.
Template Conservation																																																																								.	.
Template Sequence		P	Q	N	T	S	M	R	D	V	Y	R	K	F	D	L	G	Q	D	V	I	D	F	T	G	H	A	L	A	L	Y	R	T	D	D	Y	L	D	Q	P	C	L	E	T	I	N	R	I	K	L	Y	S	E	S	L	A	R	Y	G	K	S	P	Y	L	Y	P	L	Y	G	L	G	.	.	E	L	P	Q	G	F	A	R
Template Known Secondary structure		T	T	T	S	B								T	T													T	S			S	S	S	G	G	G	G	S	B	S													T			G	G	G			S					T	T		T	T	.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	K	E	H	G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I
Query Conservation
Alig confidence																															.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		L	S	A	I	Y	G	G	T	Y	M	L	N	K	P	V	D	D	I	I	M	E	N	G	K	V	V	G	V	K	.	.	.	.	.	.	S	E	G	E	V	A	R	C	K	Q	L	I	C	D	P	S	Y	V	P	D	R	V
Template Known Secondary structure							T					S	S									B	T	T	B						.	.	.	.	.	.		T	T				B		S						G	G	G		G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.							270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions