Job Description P0A9C0 Confidence 99.96% Date Thu Jan 5 11:09:50 GMT 2012 Rank 19 Aligned Residues 335 % Identity 19% Template c1c0iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		M	K	T	R	D	S	Q	S	S	D	V	I	I	I	G	G	G	A	T	G	A	G	I	A	R	D	C	A	L	R	G	L	R	V	I	L	V	E	R	H	D	I	A	T	G	A	T	G	R	N	H	G	L	L	H	S	G	A	R	Y	A	V	.	.	.	.	T	D	A	E	S	A	R	E	C	I	S	E	N	Q
Query Conservation																																																																.	.	.	.
Alig confidence						.	.	.	.																																																							.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		M	H	S	Q	.	.	.	.	K	R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	K	G	Y	S	V	H	I	L	A	R	D	L	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	T	L	T	D	G	P	R	Q	A	K	W	E	E	S	T	F	K
Template Known Secondary structure					S	.	.	.	.									S													T	T								S	S		T	T		T	T		T	T	S	S	G	G	G				B					S		T	T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		1001	.	.	.					.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		I	L	K	R	I	A	R	H	C	.	.	V	E	P	T	N	G	L	F	I	T	L	P	E	D	D	L	S	F	Q	A	T	F	I	R	A	C	E	E	A	G	I	S	A	E	A	I	D	P	Q	Q	A	R	I	I	E	P	A	V	N	P	A	L	I	G	A	V	K	V	P	D	G	T	V	D	P	F	R	L	T
Query Conservation											.	.
Alig confidence											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	W	V	E	L	V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	W	Y	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	C	P	P	G	A	I	G	V	T	Y	D	T	L	S	V	H	A	P	K	Y	C
Template Known Secondary structure							T	T	T	T	S	S											S	S	G	G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	T	T	T	S	T	T						G	G	G	S		T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1077	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.														.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	N	M	L	D	A	K	E	H	G	A	V	I	L	T	A	H	E	V	T	G	L	I	R	E	G	A	T	V	C	G	V	R	V	R	N	H	L	T	G	E	T	Q	A	L	H	A	P	V	V	V	N	A	A	G	I	W	G	Q	H	I	A	E	Y	A	D	L	R	I	R	M	F	P	A	K	G	S	L	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Sequence		Q	Y	L	A	R	E	L	Q	K	L	G	A	T	F	E	R	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	S	L	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G	L	G	A	K	S	I	A	G	I	D	D	Q	.	.	A	A	E	P	I	R	G	Q	T	V
Template Known Secondary structure											T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B	G	G	G	T		S	S		S							G	G	G	G	G	T	S	B	T	T			T	.	.	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		1144	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.																				.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.			.	.	.	.	.	.	.	1200	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		I	M	D	H	R	I	N	Q	H	V	I	N	R	C	R	K	P	S	D	A	D	I	L	V	P	G	D	T	I	S	L	I	G	T	T	S	L	R	I	D	Y	N	E	I	D	D	N	R	V	T	A	E	E	V	D	I	L	L	R	E	G	E	K	L	A	P	V	.	.	.	.	.	.	M	A	K	T	R	I	L
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence																																										.	.	.	.																								.	.	.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		L	V	K	S	P	C	K	R	C	T	M	D	S	S	D	P	A	S	P	A	Y	I	I	P	R	P	G	G	E	V	I	C	G	G	T	Y	G	V	G	D	.	.	.	.	W	D	L	S	V	N	P	E	T	V	Q	R	I	L	K	H	C	L	R	L	D	P	T	I	S	S	D	G	T	I	E	G	I	E	V	L
Template Known Secondary structure															S		T	T									T	T	T											T		.	.	.	.				S																		G	G	G	S	S	S	S	S	G	G	G
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		1203	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.					.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.														.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	Y	S	G	V	R	P	L	V	A	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	P	S	G	R	N	V	S	R	G	I	V	L	L	D	H	A	E	R	D	G	L	D	G	F	I	T	I	T	G	G	K	L	M	T	Y	R	L	M	A	E	W	A	T	D	A	V	C	R	K	L	G	N
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	H	N	V	G	L	R	P	A	R	R	G	G	P	R	V	E	A	E	R	I	V	L	P	L	D	R	T	K	S	P	L	S	L	G	R	G	S	A	R	A	A	K	E	K	E	V	T	L	V	H	A	Y	G	F	S	S	A	G	Y	Q	Q	S	W	G	A	A	E	D	V	A	Q	L	V	D	E	A	F	Q	R
Template Known Secondary structure												T	T	S											S			T	T	T		T	T		S	S		S					S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		1279	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.
		376	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	H
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		1359	1360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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