 |
Job Description | Q2EES9 | Confidence | 84.17% | Date | Thu Jan 5 12:33:50 GMT 2012 |
Rank | 47 | Aligned Residues | 47 |
% Identity | 9% | Template | c3op9A_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:pli0006 protein; |
PDBTitle: crystal structure of transcriptional regulator from listeria innocua
|
Resolution | 1.90 Å |
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | L | K | F | I | M | A | D | T | G | F | G | K | T | F | I | Y | D | R | I | K | S | G | D | L | P | K | A | K | V | I | H | G | R | A | R | W | L | Y | R | D | H | C | E | F | K |
Query Conservation |   |
|   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|   |   |
|
|
|
|   |
|   |   |
|   |   |
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|   |   |   |
|
|
|   |
|
|
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|   |   |   |
|   |
Template Sequence |   |
L | K | N | H | Q | I | A | E | L | L | N | V | Q | T | R | T | V | A | Y | Y | X | S | G | E | T | K | P | D | I | E | K | L | I | R | L | A | T | Y | F | H | L | S | I | D | E | L | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|