Job Description Q2EES9 Confidence 22.50% Date Thu Jan 5 12:33:50 GMT 2012 Rank 402 Aligned Residues 50 % Identity 6% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																				.	.	.																							.	.	.	.	.
Query SS confidence																				.	.	.																							.	.	.	.	.
Query Sequence		V	D	L	K	F	I	M	A	D	T	G	F	G	K	T	F	I	Y	.	.	.	D	R	I	K	S	G	D	L	P	K	A	K	V	I	H	G	R	A	R	W	L	Y	.	.	.	.	.	R	D	H	C	E	F	K	N	K	L
Query Conservation																				.	.	.																							.	.	.	.	.
Alig confidence																				.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		L	S	V	G	E	L	C	A	K	L	Q	L	S	Q	S	A	L	S	Q	H	L	A	W	L	R	R	D	G	L	V	T	T	R	K	E	A	Q	T	V	Y	Y	T	L	K	S	E	E	V	K	A	X	I	K	L	L	H	S	L
Template Known Secondary structure												T																T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions