Job Description Q2EES9 Confidence 86.01% Date Thu Jan 5 12:33:50 GMT 2012 Rank 35 Aligned Residues 54 % Identity 7% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.											.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		V	D	L	K	F	I	M	A	D	T	G	F	G	K	T	F	I	Y	D	R	I	K	.	.	.	.	.	.	.	.	.	.	S	G	D	L	P	K	A	K	V	I	H	G	R	.	.	.	A	R	W	L	Y	R	D	H	C	E	F	K	N	K	L	L	S	R	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P	Y	D	K	L	E	G	L	L	I	A	W	F	Q	Q	I	R	A	A	G
Template Known Secondary structure		S										T												T												G	G	G	G	G	T								T	T															G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions