Job Description P75697 Confidence 99.78% Date Thu Jan 5 12:13:16 GMT 2012 Rank 32 Aligned Residues 182 % Identity 15% Template d3tdta_ SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	P	F	L	L	D	A	N	L	S	A	T	N	P	P	A	I	P	H	W	W	K	R	Q	P	L	I	P	N	L	L	S	Q	E	L	K	N	Y	L	K	L	N	V	K	E	K	N	I	Q	I	A	D	.	Q	V	I	I	D	E	T	A	G	E	V	V	I	G	A	N	T	R	I	C	H	G	A	V	I	Q	G
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		V	I	G	L	L	D	S	G	A	L	R	V	A	E	K	I	D	G	Q	W	V	T	H	Q	W	L	K	K	A	V	L	L	S	F	R	I	N	D	N	K	V	M	D	G	A	E	T	R	Y	Y	D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	T	V	R	Q
Template Known Secondary structure									T	S	S		S					T	T																											S	S	S					S	S		B	T	T	T	T															T	T				B	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	I	G	A	N	C	L	I	G	N	Y	A	F	I	R	P	G	T	I	I	S	N	G	V	K	I	G	F	A	T	E	I	K	N	A	V	I	E	A	E	A	T	I	G	P	Q	C	F	I	A	D	S	V	V	A	N	Q	A	Y	L	G	A	Q	V	R	T	S	N	H	R	L	D	E	Q	P	V	S	V
Query Conservation
Alig confidence													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		G	A	F	I	A	R	N	T	V	L	M	.	P	S	Y	V	N	I	G	A	Y	V	D	E	G	T	M	V	D	T	W	A	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	.	.
Template Known Secondary structure		T					T	T					.	S					T	T					T	T					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					T	T					T	T						S	B	.	.
Template Predicted Secondary structure													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	P	E	G	I	I	A	T	G	C	D	K	L	G	C	Y	I	G	Q	R	S	R	L	G	V	Q	V	I	I	L	P	G	R	I	I	S	P	N	T	Q	L	G	P	R	V	I	V	E	R	N	L	P	T	G	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	L	G	Q	S	T	R	I	Y	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	B		S	S						T	T					T	T					T	T					T	T					T	T					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions