Job Description P37146 Confidence 36.33% Date Thu Jan 5 11:54:50 GMT 2012 Rank 78 Aligned Residues 163 % Identity 5% Template c3rm5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hydroxymethylpyrimidine/phosphomethylpyrimidine kinase PDBTitle: structure of trifunctional thi20 from yeast Resolution 2.68 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		G	A	P	S	L	M	P	D	A	L	T	P	H	E	E	A	V	L	S	N	I	S	F	M	E	A	V	H	A	R	S	Y	S	S	I	F	.	S	T	L	C	Q	T	K	D	V	D	A	A	Y	A	W	S	E	E	N	A	P	L	Q	R	K	A	Q	I	I	Q	Q	H	Y	R	G	D	D	P	L	K	K	K	I
Query Conservation																																						.
Alig confidence																																						.									.	.
Template Conservation																																															.	.
Template Sequence		V	H	C	I	A	G	S	K	A	P	C	L	E	D	M	E	K	E	L	V	I	V	G	G	V	R	T	E	M	G	Q	H	E	K	R	L	K	E	V	F	G	V	K	D	P	.	.	D	Y	F	Q	K	I	K	R	G	P	A	L	R	A	Y	S	R	Y	F	N	D	V	S	R	R	G	N	W	Q	E	L	V	A
Template Known Secondary structure											S	S																												S	S					G	.	.	G	G	T	T	S																					S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	V	F	L	E	S	F	L	F	Y	S	G	F	W	L	P	M	Y	F	S	S	R	G	K	L	T	N	T	A	D	L	I	R	L	I	I	R	D	E	A	V	H	G	Y	Y	I	G	Y	K	Y	Q	K	N	M	E	K	I	S	L	G	Q	R	E	E	L	K	S	F	A	F	D	L	L	L	E	L	Y	D	N
Query Conservation
Alig confidence																																																																.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		S	L	T	P	C	L	M	G	Y	G	E	A	L	T	K	M	K	G	K	V	T	A	P	E	G	S	V	Y	H	E	W	C	E	T	Y	A	S	S	W	Y	R	E	A	M	D	E	G	E	K	L	L	N	H	I	L	E	T	Y	P	P	E	Q	.	.	.	.	L	D	T	L	V	T	I	Y	A	E	V	C	E	L
Template Known Secondary structure																T	T	S	S				S		T	T	S									T	T	S																	T	T	T	T	S		G	G	G	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Q	Y	T	D	E	L	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	N	F	W	T	A	A	L	E
Template Known Secondary structure										T	S
Template Predicted Secondary structure
Template SS confidence
		540	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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