Job Description P37146 Confidence 97.41% Date Thu Jan 5 11:54:50 GMT 2012 Rank 33 Aligned Residues 240 % Identity 11% Template c3pw1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:phenylacetic acid degradation protein paaa; PDBTitle: the phenylacetyl-coa monooxygenase paaac subcomplex with phenylacetyl-2 coa Resolution 2.25 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	V	E	Q	Q	L	T	M	R	V	F	T	G	L	T	L	L	D	T	L	Q	N	V	I	G	A	P	S	L	M	P	D	A	L	T	P	H	E	E	A	V	L	S	N	I	S	F	M	E	A	V	H	A	R	S	Y	S	S	I	F	S	T	L	C	Q	T	K	D	V	D	A	A	Y	A	W	S	E	E
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		M	P	D	A	Y	R	K	T	L	I	R	Q	I	G	Q	H	A	H	S	E	I	V	G	M	L	P	E	G	N	.	W	I	T	R	A	P	T	L	R	R	K	A	I	L	L	A	K	V	Q	D	E	A	G	H	G	L	Y	L	Y	S	A	A	E	T	L	G	C	A	R	E	D	I	Y	Q	K	M	L	D	G	R
Template Known Secondary structure																								T						T	.	T	G	G	G		S	S																											T	T	T													T	S
Template Predicted Secondary structure																															.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	P	L	Q	R	K	A	Q	I	I	Q	Q	H	Y	R	G	D	D	P	L	K	K	K	I	A	S	V	F	L	E	S	F	L	F	Y	S	G	F	W	L	P	M	Y	F	S	S	R	G	K	L	T	N	T	A	D	L	I	R	L	I	I	R	D	E	A	V	H	G	Y	Y	I	G	Y	K	Y	Q	K	N	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	M	K	Y	S	S	I	F	N	Y	P	T	L	S	W	A	D	I	G	V	I	G	W	L	V	D	G	A	A	I	V	N	Q	V	A	L	C	R	T	S	Y	G	P	.	Y	A	R	A	M	V	K	I	C	K	E	E	S	F	H	Q	R	Q	G	F	E	A	C	M	A	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S				G	G	G	G	S				S																						G	G	G		S	B			.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																											.
Template SS confidence
												102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.																		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	I	S	L	G	Q	R	E	E	L	K	S	F	A	F	D	L	L	L	E	L	Y	D	N	E	L	Q	Y	T	D	E	L	Y	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	W	A	D	D	V	K	A	F	L	C	Y	N	A	N	K	A	L	M	N	L	G	Y	E	P	L
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	S	E	A	.	.	.	.	.	.	.	.	.	Q	K	Q	M	L	Q	D	A	I	N	R	F	W	W	P	A	L	M	M	F	G	P	N	D	D	N	S	P	N	S	A	R	S	L	T	W	K	I	K	R	F	T	N	D	E	L	R	Q	R	F	V	D	N	T	V	P	Q	V	E	M	L	G	M	T	V	P
Template Known Secondary structure		T	S				.	.	.	.	.	.	.	.	.																			T	T		S		T	T	S		T	T							T	T	S		S	S																				T	T				S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		271	.	.				.	.	.	.	.	.							280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.							.	.	.	.	.	.													.	.
Query SS confidence					.	.	.							.	.	.	.	.	.													.	.
Query Sequence		F	P	A	.	.	.	E	M	A	E	V	N	.	.	.	.	.	.	P	A	I	L	A	A	L	S	P	N	A	D	.	.	E	N	H	D	F	F	S	G	S	G	S	S	Y	V	M	G	K
Query Conservation					.	.	.							.	.	.	.	.	.													.	.
Alig confidence					.	.	.							.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		D	P	D	L	H	F	D	T	E	S	G	H	Y	R	F	G	E	I	D	W	Q	E	F	N	E	V	I	N	G	R	G	I	C	N	Q	E	R	L	D	A	K	R	K	A	W	E	E	G	T
Template Known Secondary structure			T	T					T	T	T	T																	T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions