Job Description P37146 Confidence 71.90% Date Thu Jan 5 11:54:50 GMT 2012 Rank 62 Aligned Residues 177 % Identity 11% Template c3oqlA_ PDB info PDB header:transcription Chain: A: PDB Molecule:tena homolog; PDBTitle: crystal structure of a tena homolog (pspto1738) from pseudomonas2 syringae pv. tomato str. dc3000 at 2.54 a resolution Resolution 2.54 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.
Query Sequence		M	R	V	F	T	G	L	T	L	L	D	T	L	Q	N	V	I	G	A	P	S	L	M	P	D	A	L	T	P	H	.	.	.	.	.	.	.	.	.	E	E	A	V	L	S	N	I	S	F	M	E	A	V	H	A	R	S	Y	S	S	I	F	S	T	L	C	Q	T	K	D	V	D	A	A	Y	A	W	S	E	E
Query Conservation																																.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		P	Q	I	X	R	Q	Y	L	I	G	G	W	P	V	V	E	Q	F	A	V	Y	X	A	K	N	L	T	K	T	R	F	G	R	H	P	G	E	D	X	A	R	R	W	L	X	R	N	I	R	V	E	L	N	H	A	D	Y	W	V	N	W	C	A	A	H	D	V	T	L	E	.	.	.	D	L	H	D	Q	R	V
Template Known Secondary structure																												T	T			T	T	S																		T	T	T											T	T	T					.	.	.					T		S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																													.										.	.																										.	.	.	.
Query SS confidence																													.										.	.																										.	.	.	.
Query Sequence		N	A	P	L	Q	R	K	A	Q	I	I	Q	Q	H	Y	R	G	D	D	P	L	K	K	K	I	A	S	.	V	F	L	E	S	F	L	F	Y	.	.	S	G	F	W	L	P	M	Y	F	S	S	R	G	K	L	T	N	T	A	D	L	I	R	L	I	.	.	.	.	I	R	D	E	A	V	H	G	Y	Y	I	G
Query Conservation																													.										.	.																										.	.	.	.
Alig confidence																													.										.	.																										.	.	.	.					.	.
Template Conservation																																																																										.	.
Template Sequence		A	P	E	L	H	A	L	S	H	W	C	W	Q	T	S	S	S	D	S	L	A	V	A	X	A	A	T	N	Y	A	I	E	G	A	T	G	E	W	S	A	V	V	C	S	T	G	V	Y	A	E	A	F	A	E	E	T	R	K	K	S	X	K	W	L	K	X	H	A	Q	Y	D	A	.	.	H	P	W	E	A	L
Template Known Secondary structure			G	G	G	G													S									T	T	T															S	S	S					T	S																	T				.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	Y	Q	K	N	M	E	K	I	S	L	G	Q	R	E	E	L	K	S	F	A	F	D	L	L	L	E	L	Y	D	N	E	L	Q	Y	T	D	E	L	Y
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		E	I	I	C	T	L	V	G	N	K	P	S	L	Q	L	.	.	.	Q	A	E	L	R	Q	A	V	T	K	S	Y	D	Y	X	Y	L	F	L	E	R	C	I
Template Known Secondary structure										S	S						.	.	.
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions