Job Description P37146 Confidence 53.05% Date Thu Jan 5 11:54:50 GMT 2012 Rank 72 Aligned Residues 218 % Identity 11% Template c3mvuA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tena family transcriptional regulator; PDBTitle: crystal structure of a tena family transcription regulator2 (tm1040_3656) from silicibacter sp. tm1040 at 1.80 a resolution Resolution 1.80 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		D	D	K	D	L	E	V	W	N	R	L	T	S	N	F	W	L	P	.	E	K	V	P	L	S	N	D	I	P	A	W	Q	T	L	T	V	V	E	Q	Q	L	T	M	R	V	F	T	G	L	T	L	L	D	T	L	Q	N	V	I	G	A	P	S	L	M	P	D	A	L	T	P	H	E	E	A	V	L	S	N	I
Query Conservation																				.
Alig confidence																				.												.																					.	.	.
Template Conservation																																.																					.	.	.
Template Sequence		Y	G	K	A	F	S	L	X	R	A	E	A	E	P	A	W	R	A	Y	T	H	H	A	F	V	E	G	L	K	A	.	G	T	L	P	R	E	A	F	L	H	Y	L	Q	Q	D	Y	V	F	L	I	.	.	.	H	F	S	R	A	W	A	L	A	V	V	K	S	E	T	H	S	E	X	L	A	A	V	G	T	V
Template Known Secondary structure		T											T	T	T							T										.	T		S																		.	.	.												T			S
Template Predicted Secondary structure																																.																					.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	M	E	A	V	H	A	R	S	Y	S	S	I	F	S	T	L	C	Q	T	K	D	V	D	A	A	Y	A	W	S	E	E	N	A	P	L	Q	R	K	A	Q	I	I	Q	Q	H	Y	R	G	D	D	P	L	K	K	K	I	A	S	V	F	L	E	S	F	L	F	Y	S	G	F	W	L	P	M	Y	F	S	S
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		N	A	L	V	A	E	E	X	Q	L	H	I	G	I	C	E	A	S	G	I	S	Q	E	.	.	.	A	L	F	A	T	R	E	R	A	E	N	L	A	Y	T	R	F	V	L	E	A	G	Y	S	G	D	L	L	D	L	L	A	A	L	A	P	C	V	X	G	Y	G	E	I	G	K	R	L	T	A	E	A	T	S
Template Known Secondary structure						T	T												T	T					.	.	.				T																					S																												S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		R	G	K	L	T	N	T	A	D	L	I	R	L	I	I	R	D	E	A	V	H	G	Y	Y	I	G	Y	K	Y	Q	K	N	M	E	K	.	.	I	S	L	G	Q	R	E	E	L	K	S	F	A	F	D	L	L	L	E	L	Y	D	N	E	L	Q	Y	T	D	E	L	Y	A	E
Query Conservation																																					.	.
Alig confidence							.	.	.																												.	.
Template Conservation							.	.	.
Template Sequence		T	L	Y	G	D	.	.	.	W	I	D	T	Y	G	G	D	D	Y	Q	A	A	C	K	A	V	G	T	L	L	D	D	A	L	E	R	R	L	G	A	E	F	T	S	S	P	R	W	S	R	L	C	Q	T	F	H	T	A	T	E	L	E	V	G	F	W	Q	X	G	L	T	P
Template Known Secondary structure		S	T	T			.	.	.							S																								T	T	G	G	G	S																									T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		158	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions