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Job DescriptionP37146
Confidence100.00%DateThu Jan 5 11:54:50 GMT 2012
Rank16Aligned Residues263
% Identity21%Templatec3hf1B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 PDBTitle: crystal structure of human p53r2
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  WN. . KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEE
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Template Sequence  FVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEAR
Template Known Secondary structure  S


S
S
TT


GGGS

TTS
TTTTTTTTTT


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   42.......50.........60.........70.........80.........90.........100.........110.........120.
 
   8990.........100.........110.........120.........130.........140.. .......150.........160......
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Query Sequence  AVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHY. . RGDDPLKKKIASVFLESFLFYSGF
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Template Sequence  CFYGFQILIENVHSEMYSLLIDTYIRDPKKRE. FLFNAIMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSF
Template Known Secondary structure  S
ST.TGGG


TTSSSSS
TTT
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   122.......130.........140.........150... ......160.........170.........180.........190.........200
 
   167..170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  WLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE. . .
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Template Sequence  AAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE. . . . . . . ERVREIIVDAVKIEQEFLTEALPVGLI
Template Known Secondary structure  TT


SS


T.......TTTTS
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   203......210.........220.........230.........240........ .250.........260.........270.....
 
   244.....250.........260.........270.........280.....
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Query Sequence  TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA
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Template Sequence  GMNCILMKQYIEFVADRLLVELGFSKVFQAE. . . . NPFDFME
Template Known Secondary structure  T

TT


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   276...280.........290.........300...... ...310...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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