Job Description P37146 Confidence 100.00% Date Thu Jan 5 11:54:50 GMT 2012 Rank 21 Aligned Residues 268 % Identity 16% Template c3ee4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable ribonucleoside-diphosphate reductase; PDBTitle: r2-like ligand binding mn/fe oxidase from m. tuberculosis Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		S	A	I	N	W	N	K	I	S	D	D	K	D	L	E	V	W	N	R	L	T	S	N	F	W	L	P	E	K	V	P	L	S	N	D	I	P	A	W	Q	T	L	T	V	V	E	Q	Q	L	T	M	R	V	F	T	G	L	T	L	L	D	T	L	Q	N	V	I	G	A	P	S	L	.	.	M	P	D	A	L	T
Query Conservation																																																																										.	.
Alig confidence									.	.	.	.																																																														.	.
Template Conservation									.	.	.	.
Template Sequence		G	G	L	N	W	A	S	.	.	.	.	L	P	L	K	L	F	A	G	G	N	A	K	F	W	H	P	A	D	I	D	F	T	R	D	R	A	D	W	E	K	L	S	D	D	E	R	D	Y	A	T	R	L	C	T	Q	F	I	A	G	E	E	A	V	T	E	D	I	Q	P	F	M	S	A	M	R	A	E	G	R
Template Known Secondary structure		T				T	T	S	.	.	.	.												T				G	G	G	S			T	T								S																										T										T	T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.																							.
Query SS confidence																																																	.	.	.	.	.																							.
Query Sequence		P	H	E	E	A	V	L	S	N	I	S	F	M	E	A	V	H	A	R	S	Y	S	S	I	F	S	T	L	C	Q	T	K	D	V	D	A	A	Y	A	W	S	E	E	N	A	P	L	.	.	.	.	.	Q	R	K	A	Q	I	I	Q	Q	H	Y	R	G	D	D	P	L	K	K	K	I	A	.	S	V	F	L	E
Query Conservation																																																	.	.	.	.	.																							.
Alig confidence																																																	.	.	.	.	.																							.
Template Conservation
Template Sequence		L	A	D	E	M	Y	L	T	Q	F	A	F	E	E	A	K	H	T	Q	V	F	R	M	W	L	D	A	V	G	I	S	E	D	L	H	R	Y	L	D	D	L	P	A	Y	R	Q	I	F	Y	A	E	L	P	E	C	L	N	A	L	S	A	D	P	S	P	A	A	Q	V	R	A	S	V	T	Y	N	H	I	V	E
Template Known Secondary structure																														T			S			G	G	G	G	T	T										T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		S	F	L	F	Y	S	G	F	.	W	L	P	M	Y	F	S	S	R	G	K	L	T	N	T	A	D	L	I	R	L	I	I	R	D	E	A	V	H	G	Y	Y	I	G	Y	K	Y	Q	K	N	M	E	K	I	S	L	G	Q	R	E	E	L	K	S	F	A	F	D	L	L	L	E	L	Y	D	N	E	L	Q	Y	T
Query Conservation										.
Alig confidence										.																																																		.
Template Conservation																																																												.
Template Sequence		G	M	L	A	L	T	G	Y	Y	A	W	H	K	I	C	V	E	R	A	I	L	P	G	M	Q	E	L	V	R	R	I	G	D	D	E	R	R	H	M	A	W	G	T	F	T	C	R	R	H	V	A	A	D	D	A	N	W	T	.	V	F	E	T	R	M	N	E	L	I	P	L	A	L	R	L	I	E	E	G	F
Template Known Secondary structure		T	T														T	T	T	T																																			T					.
Template Predicted Secondary structure																																																												.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	Y	A	E	T	P	W	A	D	D	V	K	A	F	L	C	Y	N	A	N	K	A	L	M	N	L	G	Y	E	P	L	F	P	A	E	M	A	E	V	N	P	A	I
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		A	L	Y	G	D	Q	P	P	F	D	L	S	K	D	D	F	L	Q	Y	S	T	D	K	G	M	R	R	F	G	.	.	.	T	I	S	N	A	R	G	R	P	V	A	E	I
Template Known Secondary structure			T	T	T	T			S	T	T																				.	.	.				T	T	T	T			G	G	G	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions