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Job DescriptionP37146
Confidence100.00%DateThu Jan 5 11:54:50 GMT 2012
Rank19Aligned Residues241
% Identity20%Templatec2vuxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 b; PDBTitle: human ribonucleotide reductase, subunit m2 b
Resolution2.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11. .......20.........30.........40.........50.........60.........70.........80........
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Query Sequence  WN. . KISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEE
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Template Sequence  FVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFANENLVE. . . . . . RFSQEVQVPEAR
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   42.......50.........60.........70.........80.........90.........100... ......110.....
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  AVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWL
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Template Sequence  CFYGFQILIENVHSEMYSLLIDTYIRDPK. . . . . . . . . KRPYVKKKADW. . . . . . . . TFGERVVAFAAVEGVFFSGSFAA
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   122.......130.........140.........150 .........160. ........170.........180....
 
   169170.........180.........190.........200.........210.........220.........230.........240... ..
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Query Sequence  PMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE. . . TP
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Template Sequence  IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPS. . . . . . . EERVREIIVDAVKIEQEFLTEALPVGLIGM
Template Known Secondary structure  TT

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   205....210.........220.........230.........240....... ..250.........260.........270.......
 
   246...250.........260.........270.........280.....
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Query Sequence  WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAA
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Template Sequence  NCILMKQYIEFVADRLLVELGFSKVFQAE. . . . NPFDFME
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   278.280.........290.........300...... ...310...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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