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Job DescriptionP37146
Confidence100.00%DateThu Jan 5 11:54:50 GMT 2012
Rank18Aligned Residues252
% Identity19%Templatec2p1iA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ribonucleotide reductase, small chain; PDBTitle: plasmodium yoelii ribonucleotide reductase subunit r2 (py03671)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
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Query Sequence  DDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNIS
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Template Sequence  YPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKHVLAFFAASENLASK. . . . . FLREVEIIEAKKFYSFQI
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   48.50.........60.........70.........80.........90.........100.... .....110.........120..
 
   96...100.........110...... ...120.........130.........140........ .150.........160.........170...
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Query Sequence  FMEAVHARSYSSIFSTLCQTK. DVDAAYAWSEENAPLQRKAQIIQQHYRGDDPL. KKKIASVFLESFLFYSGFWLPMYFS
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Template Sequence  AVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFK
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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   174.....180.........190.........200.........210.........220.........230.........240... ......250
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Query Sequence  SRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE. . . TPWADDV
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Template Sequence  KQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPE. . . . . . . NVVQNIVKEAVEVERSFICESLPCDLIGMNSRLM
Template Known Secondary structure  TTT
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   208.210.........220.........230.........240...... ...250.........260.........270.........280
 
   251........260.........270.........280...
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Query Sequence  KAFLCYNANKALMNLGYEPLFPAEMAEVNPAIL
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Template Sequence  SQYIEFVADRLLECLGCSKVFHSK. . . . NPFNW
Template Known Secondary structure  TT


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   281........290.........300.... .....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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