Job Description P37146 Confidence 100.00% Date Thu Jan 5 11:54:50 GMT 2012 Rank 14 Aligned Residues 257 % Identity 19% Template c1smqD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:ribonucleoside-diphosphate reductase small chain PDBTitle: structure of the ribonucleotide reductase rnr2 homodimer2 from saccharomyces cerevisiae Resolution 3.10 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		K	I	S	D	D	K	D	L	E	V	W	N	R	L	T	S	N	F	W	L	P	E	K	V	P	L	S	N	D	I	P	A	W	Q	T	.	L	T	V	V	E	Q	Q	L	T	M	R	V	F	T	G	L	T	L	L	D	T	L	Q	N	V	I	G	A	P	S	L	M	P	D	A	L	T	P	H	E	E	A	V	L
Query Conservation																																					.
Alig confidence																																					.																										.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		P	I	K	Y	H	E	I	W	Q	A	Y	K	R	A	E	A	S	F	W	T	A	E	E	I	D	L	S	K	D	I	H	D	W	N	N	R	M	N	E	N	E	R	F	F	I	S	R	V	L	A	F	F	A	A	S	E	N	L	V	E	N	.	.	.	.	.	F	S	T	E	V	Q	I	P	E	A	K	S	F	Y
Template Known Secondary structure		S		S													T	T				G	G	G				S									T	S																T	T							T	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																																	.	.
Query SS confidence																									.																																	.	.
Query Sequence		S	N	I	S	F	M	E	A	V	H	A	R	S	Y	S	S	I	F	S	T	L	C	Q	.	T	K	D	V	D	A	A	Y	A	W	S	E	E	N	A	P	L	Q	R	K	A	Q	I	I	Q	Q	H	Y	R	G	D	D	.	.	P	L	K	K	K	I	A	S	V	F	L	E	S	F	L	F	Y	S	G	F	W	L
Query Conservation																									.																																	.	.
Alig confidence																									.																																	.	.
Template Conservation
Template Sequence		G	F	Q	I	M	I	E	N	I	H	S	E	T	Y	S	L	L	I	D	T	Y	I	K	D	P	K	E	S	E	F	L	F	N	A	I	H	T	I	P	E	I	G	E	K	A	E	W	A	L	R	W	I	Q	D	A	D	A	L	F	G	E	R	L	V	A	F	A	S	I	E	G	V	F	F	S	G	S	F	A	S
Template Known Secondary structure																																			T	T	S																T	T	S	S	S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		P	M	Y	F	S	S	R	G	K	L	T	N	T	A	D	L	I	R	L	I	I	R	D	E	A	V	H	G	Y	Y	I	G	Y	K	Y	Q	K	N	M	E	K	I	S	L	G	Q	R	E	E	L	K	S	F	A	F	D	L	L	L	E	L	Y	D	N	E	L	Q	Y	T	D	E	L	Y	A	E	.	.	.	T	P
Query Conservation																																																																													.	.	.
Alig confidence																																													.	.	.	.	.	.	.																										.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		I	F	W	L	K	K	R	G	M	M	P	G	L	T	F	S	N	E	L	I	C	R	D	E	G	L	H	T	D	F	A	C	L	L	F	A	H	L	K	N	K	P	D	.	.	.	.	.	.	.	P	A	I	V	E	K	I	V	T	E	A	V	E	I	E	Q	R	Y	F	L	D	A	L	P	V	A	L	L	G	M
Template Known Secondary structure								T	T																															S	S				.	.	.	.	.	.	.																				T	T	T			G	G	G	G	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	D	D	V	K	A	F	L	C	Y	N	A	N	K	A	L	M	N	L	G	Y	E	P	L	F	P	A	E	M	A	E	V	N	P	A	I	L	A	A
Query Conservation
Alig confidence																															.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		N	A	D	L	M	N	Q	Y	V	E	F	V	A	D	R	L	L	V	A	F	G	N	K	K	Y	Y	K	V	E	.	.	.	.	N	P	F	D	F	M	E
Template Known Secondary structure																						T				S	S				.	.	.	.				S	T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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