Job Description Q46942 Confidence 99.80% Date Thu Jan 5 12:36:01 GMT 2012 Rank 12 Aligned Residues 94 % Identity 26% Template d1ys7a1 SCOP info DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like Resolution 1.58

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	D	N	I	E	F	W	P	E	H	R	K	L	I	S	V	H	N	A	D	L	N	V	V	L	T	T	P	A	S	R	C	L	S	L	L	L	E	A	F	P	D	V	V	A	Q	Q	D	F	F	T	R	V	W	E	E	E	G	M	R	V	P	T	N	T	L	Y	Q	N	I	S	I	I	R	R	G	F	R
Query Conservation
Alig confidence																			.	.	.																																					.	.
Template Conservation																			.	.	.																																					.	.
Template Sequence		I	T	V	G	P	L	E	V	D	I	P	G	R	R	A	R	V	.	.	.	N	G	V	D	V	D	L	T	K	R	E	F	D	L	L	A	V	L	A	E	H	K	T	A	V	L	S	R	A	Q	L	L	E	L	V	W	.	.	G	Y	D	F	A	D	T	N	V	V	D	V	F	I	G	Y	L	R	R	K	L	E
Template Known Secondary structure					T	T					T	T	T	T					.	.	.	T	T																			T	T	T			B											.	.
Template Predicted Secondary structure																			.	.	.																																					.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	D	T	T	H	S	L	I	A	T	V	P	R	R	G	F	K	I	H	N	D
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		A	G	P	R	.	.	.	.	L	L	H	T	V	R	G	V	G	F	V	L	R	M	Q
Template Known Secondary structure						.	.	.	.						T	T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		213	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions