Job Description Q46942 Confidence 70.01% Date Thu Jan 5 12:36:01 GMT 2012 Rank 37 Aligned Residues 58 % Identity 16% Template d1ylfa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	R	C	L	S	L	L	L	E	A	F	P	D	V	V	A	Q	Q	D	F	F	T	R	V	W	E	E	E	G	M	R	V	P	T	N	T	L	Y	Q	N	I	S	I	I	R	R	G	F	R	A	V	G	D	T	T	H	S	L	I	A	T	V	P	R	R	G	F	K	I	H	N	D	I	N
Query Conservation
Alig confidence																												.	.	.	.	.	.																.	.	.	.	.	.	.			.	.					.	.
Template Conservation																												.	.	.	.	.	.																.	.	.	.	.	.	.			.	.					.	.
Template Sequence		A	V	H	I	L	S	I	L	K	N	N	P	S	S	L	C	T	S	D	Y	X	A	E	S	V	N	.	.	.	.	.	.	T	N	P	V	V	I	R	K	I	X	S	Y	L	K	Q	.	.	.	.	.	.	.	A	G	.	.	F	V	Y	V	.	.	N	G	G	A	G	L	L	K	D	L	H
Template Known Secondary structure												S		G	G	G											T	.	.	.	.	.	.	S															.	.	.	.	.	.	.	T	T	.	.	S				.	.							S	S		G	G
Template Predicted Secondary structure																												.	.	.	.	.	.																.	.	.	.	.	.	.			.	.					.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.			.	.	.	.			60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions