Job Description Q46942 Confidence 99.86% Date Thu Jan 5 12:36:01 GMT 2012 Rank 2 Aligned Residues 98 % Identity 16% Template d1opca_ SCOP info DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like Resolution 1.95

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	D	N	I	E	F	W	P	E	H	R	K	L	I	S	V	H	N	A	D	L	N	V	V	L	T	T	P	A	S	R	C	L	S	L	L	L	E	A	F	P	D	V	V	A	Q	Q	D	F	F	T	R	V	W	E	E	E	G	M	R	V	P	T	N	T	L	Y	Q	N	I	S	I	I	R	R	G	F	R
Query Conservation
Alig confidence																			.	.	.																																							.
Template Conservation																			.	.	.																																							.
Template Sequence		I	A	F	G	K	F	K	L	N	L	G	T	R	E	M	F	R	.	.	.	E	D	E	P	M	P	L	T	S	G	E	F	A	V	L	K	A	L	V	S	H	P	R	E	P	L	S	R	D	K	L	M	N	L	A	R	G	R	.	E	Y	S	A	M	E	R	S	I	D	V	Q	I	S	R	L	R	R	M	V	E
Template Known Secondary structure					T	T					T	T	T	T					.	.	.	T	T																			S	T	T															S	.	S	S		T	T	S	S
Template Predicted Secondary structure																			.	.	.																																							.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	D	T	T	H	S	L	I	A	T	V	P	R	R	G	F	K	I	H	N	D
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		E	D	P	A	H	P	R	.	Y	I	Q	T	V	W	G	L	G	Y	V	F	V	P	D
Template Known Secondary structure		S		T	T	S		S	.	S					T	T	T
Template Predicted Secondary structure									.
Template SS confidence
		214	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions