Job Description Q46942 Confidence 91.34% Date Thu Jan 5 12:36:01 GMT 2012 Rank 25 Aligned Residues 55 % Identity 22% Template d1j5ya1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Biotin repressor-like Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	L	S	L	L	L	E	A	F	P	D	V	V	A	Q	Q	D	F	F	T	R	V	W	E	E	E	G	M	R	V	P	T	N	T	L	Y	Q	N	I	S	I	I	R	R	G	F	R	A	V	G	D	T	T	H	S	L	I	A	T	V	P	R	R	G	F	K	I	H	N	D
Query Conservation
Alig confidence													.													.	.	.	.	.	.																	.	.	.	.				.	.	.	.							.
Template Conservation													.													.	.	.	.	.	.																	.	.	.	.				.	.	.	.							.
Template Sequence		S	I	V	R	I	L	E	R	S	K	E	.	P	V	S	G	A	Q	L	A	E	E	L	S	.	.	.	.	.	.	V	S	R	Q	V	I	V	Q	D	I	A	Y	L	R	S	L	.	.	.	.	G	Y	N	.	.	.	.	I	V	A	T	P	R	.	G	Y	V	L	A	G	G
Template Known Secondary structure											S	S	.		B										T	.	.	.	.	.	.	S																.	.	.	.	T			.	.	.	.					T	T	.
Template Predicted Secondary structure													.													.	.	.	.	.	.																	.	.	.	.				.	.	.	.							.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.					.	.	.	.	.	60		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions