Return to main results Retrieve Phyre Job Id

Job DescriptionQ46942
Confidence19.47%DateThu Jan 5 12:36:01 GMT 2012
Rank90Aligned Residues41
% Identity20%Templated1b4aa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Arginine repressor (ArgR), N-terminal DNA-binding domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70........
Predicted Secondary structure 














Query SS confidence 










































Query Sequence  RCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISII
Query Conservation   

  
       


  
   

   
  
   

   

 
Alig confidence 










.










.


















Template Conservation    
  

    .
 

 

   
.   
  









 

Template Sequence  IKIREIIMSND. IETQDELVDRL. REAGFNVTQATVSRDIKEM
Template Known Secondary structure  S
.

S.TT



T
Template Predicted Secondary structure 

.


.



Template SS confidence 










































   8.10........ .20......... 30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions