Job Description Q46942 Confidence 99.83% Date Thu Jan 5 12:36:01 GMT 2012 Rank 5 Aligned Residues 96 % Identity 17% Template c3q9vB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra c-terminal domain(123-221) from deinococcus2 radiodurans Resolution 1.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	D	N	I	E	F	W	P	E	H	R	K	L	I	S	V	H	N	A	D	L	N	V	V	L	T	T	P	A	S	R	C	L	S	L	L	L	E	A	F	P	D	V	V	A	Q	Q	D	F	F	T	R	V	W	E	E	E	G	M	R	V	P	T	N	T	L	Y	Q	N	I	S	I	I	R	R	G	F	R
Query Conservation
Alig confidence																			.	.	.																																							.
Template Conservation																			.	.	.																																							.
Template Sequence		L	S	M	G	D	L	T	L	D	P	Q	K	R	L	V	T	Y	.	.	.	K	G	E	E	L	R	L	S	P	K	E	F	D	I	L	A	L	L	I	R	Q	P	G	R	V	Y	S	R	Q	E	I	G	Q	E	I	W	Q	G	.	R	L	P	E	G	S	N	V	V	D	V	H	M	A	N	L	R	A	K	L	R
Template Known Secondary structure					T	T					T	T	T	T					.	.	.	T	T																	T	T	S	T	T														T	T	.				T	T
Template Predicted Secondary structure																			.	.	.																																							.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	D	T	T	H	S	L	I	A	T	V	P	R	R	G	F	K	I	H	N
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		D	L	D	G	Y	G	.	.	L	L	R	T	V	R	G	V	G	Y	A	L	R	G
Template Known Secondary structure			T	T			S	.	.						T	T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		202	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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