Job Description Q46942 Confidence 18.10% Date Thu Jan 5 12:36:01 GMT 2012 Rank 95 Aligned Residues 58 % Identity 12% Template c3lwfD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution Resolution 2.06 Å

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		34	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure														.																																																				.	.
Query SS confidence														.																																																				.	.
Query Sequence		A	S	R	C	L	S	L	L	L	E	A	F	.	P	D	V	V	A	Q	Q	D	F	F	T	R	V	W	E	E	E	G	M	R	V	P	T	N	T	L	Y	Q	N	I	S	I	I	R	R	G	F	R	A	V	G	D	T	T	H	S	L	I	A	T	V	.	.	P	R	R	G	F	K	I	H	N	D
Query Conservation														.																																																				.	.
Alig confidence														.															.	.	.	.	.	.																.	.	.	.	.	.	.			.	.						.	.
Template Conservation																													.	.	.	.	.	.																.	.	.	.	.	.	.			.	.
Template Sequence		G	L	T	I	T	L	E	L	A	K	R	I	G	D	G	P	I	S	L	R	S	I	A	Q	D	K	N	.	.	.	.	.	.	L	S	E	H	Y	L	E	Q	L	I	G	P	L	R	N	.	.	.	.	.	.	.	A	G	.	.	I	V	K	S	I	R	G	A	H	G	G	Y	V	L	N	G	D
Template Known Secondary structure												T	T	T	S			B										T	.	.	.	.	.	.																.	.	.	.	.	.	.	T	T	.	.	S						S	T	T							S
Template Predicted Secondary structure																													.	.	.	.	.	.																.	.	.	.	.	.	.			.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions