Job Description Q46942 Confidence 99.12% Date Thu Jan 5 12:36:01 GMT 2012 Rank 20 Aligned Residues 93 % Identity 17% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	I	N	D	N	I	E	F	W	P	E	H	R	K	L	I	S	V	H	N	A	D	L	N	V	V	L	T	T	P	A	S	R	C	L	S	L	L	L	E	A	F	P	D	V	V	A	Q	Q	D	F	F	T	R	V	W	E	E	E	G	M	R	V	P	T	N	T	L	Y	Q	N	I	S	I	I	R	R	G	F
Query Conservation
Alig confidence																				.	.	.																																					.	.	.	.	.	.
Template Conservation																				.	.	.																																					.	.	.	.	.	.
Template Sequence		K	L	V	C	G	D	L	I	L	D	T	A	T	K	K	A	Y	R	.	.	.	G	S	K	E	I	D	L	T	K	K	E	Y	Q	I	L	E	Y	L	V	X	N	K	N	R	V	V	T	K	E	E	L	Q	E	H	L	W	.	.	.	.	.	.	V	F	S	D	V	L	R	S	H	I	K	N	L	R	K	K	V
Template Known Secondary structure						T	T					T	T	T	T					.	.	.	T	T																			T	T	T	S													.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.																																					.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	G	D	T	T	H	S	L	I	A	T	V	P	R	R	G	F	K	I	H	N	D
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		D	K	G	F	K	K	K	.	.	I	I	H	T	V	R	G	I	G	Y	V	A	R	D	E
Template Known Secondary structure			T	T		S	S		.	.						T	T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		204	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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