Job Description P43531 Confidence 100.00% Date Thu Jan 5 12:02:22 GMT 2012 Rank 4 Aligned Residues 384 % Identity 10% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		F	M	R	V	T	L	A	L	F	S	A	G	L	A	T	F	A	L	L	Y	C	V	Q	P	I	L	P	V	.	L	S	Q	E	F	G	L	T	P	A	N	S	S	I	S	L	S	I	S	T	A	M	L	A	I	G	L	L	F	T	G	P	L	S	D	A	I	G	R	K	P	V	M	V	T	A	L	L	L	A	S
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		K	N	T	N	F	W	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	Y	L	L	W	I	I	T	G	M	L
Template Known Secondary structure			S																																																					T												T	T		T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		I	C	T	L	L	S	T	M	M	T	S	W	H	G	I	L	I	M	R	A	L	I	G	L	S	L	S	G	V	A	A	V	G	M	T	Y	L	S	E	E	I	H	P	S	F	V	A	F	S	M	.	.	.	.	.	.	G	L	Y	I	S	G	N	S	I	G	G	M	S	G	R	L	I	S	G	V	F	T	D	F
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.
Template Conservation
Template Sequence		V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V	G	I	M	F	T	I
Template Known Secondary structure			T								T							T	T								T	T	T	T	G	G	G	G	G	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.									240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.
Query Sequence		F	N	W	R	I	A	L	A	A	I	G	C	F	A	L	A	S	A	L	M	F	W	K	I	L	P	E	S	R	H	F	R	P	T	S	L	R	P	K	T	L	F	I	N	F	R	L	H	W	R	D	R	G	.	.	.	.	.	.	.	.	L	P	L	L	F	A	E	G	F	L	L	M	G	S	F	V	T	L	F
Query Conservation																																																							.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V	F	D	Q	Q	F	A
Template Known Secondary structure																							S	S				S		S	S	S		S	S					S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	I	G	Y	R	L	M	L	S	P	W	H	V	S	Q	A	V	V	G	L	L	S	L	A	Y	L	T	G	T	W	S	S	P	K	A	G	T	M	T	T	R	Y	G	R	G	P	V	M	L	F	S	T	G	V	M	L	F	G	L	L	M	T	L	F	S	S	L	W	L	I	F	A	G	M	L	L	F	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	F	A	T	S	A	L	E	V	V	I	L	K	T	L	H	M	F
Template Known Secondary structure					T	T	S	S	S																									T	T																														T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																				.										.
Query SS confidence																				.										.
Query Sequence		G	F	F	A	A	H	S	V	A	S	S	W	I	G	P	R	A	K	.	R	A	K	G	Q	A	S	S	L	.	Y	L	F	S	Y	Y	L	G	S	S	I	A	G	T	L	G	G	V	F	W	H	N	Y	G	W	N	G	V	G	A	F	I	A	L	M	L	V	I	A	L	L	V	G	T	R	L	H	R	R	L	H
Query Conservation																				.										.
Alig confidence																				.										.
Template Conservation
Template Sequence		E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	F	Q	G	A	Y	L	V	L	G	L	V	A	L	G	F	T	L	I	S	V	F	T	L	S	G	P	G
Template Known Secondary structure																		S		G	G	G										T	T	T																																											S			S	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		417
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		405

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions