 |
| Job Description | P43531 | | Confidence | 2.66% | Date | Thu Jan 5 12:02:22 GMT 2012 |
| Rank | 17 | Aligned Residues | 31 |
| % Identity | 13% | Template | c3jywC_ |
| PDB info |
PDB header:ribosome | Chain: C: PDB Molecule:60s ribosomal protein l3; |
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
|
| Resolution | 8.90 Å |
|
| | |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | S | R | T | T | T | V | D | G | A | P | A | S | D | T | D | K | Q | S | I | S | Q | P | N | Q | F | I | K | R | G | T |
| Query Conservation | |
|
| | | | | | | | |
| | | | | | | | | | | | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
| | |
| |
|
| |
| | | |
|
|
|
| | |
|
|
|
|
|
|
|
|
|
| Template Sequence | |
M | T | T | I | V | R | D | L | D | R | P | G | S | K | F | H | K | R | E | V | V | E | A | V | T | V | V | D | T | P | P |
| Template Known Secondary structure | |
B |
|
|
|
| B |
|
| S | S | T | T |
| T | T | T | T |
|
| B |
|
|
|
|  | | |  |
|
|
|
| Template Predicted Secondary structure | |
| | | | | | |
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
