Job Description P43531 Confidence 1.34% Date Thu Jan 5 12:02:22 GMT 2012 Rank 71 Aligned Residues 31 % Identity 13% Template c2zkrb_ PDB info PDB header:ribosomal protein/rna Chain: B: PDB Molecule:rna expansion segment es4; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	R	T	T	T	V	D	G	A	P	A	S	D	T	D	K	Q	S	I	S	Q	P	N	Q	F	I	K	R	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	T	H	I	V	R	E	V	D	R	P	G	S	K	V	N	K	K	E	V	V	E	A	V	T	I	V	E	T	P	P
Template Known Secondary structure												T	T	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions