Job Description P43531 Confidence 1.57% Date Thu Jan 5 12:02:22 GMT 2012 Rank 54 Aligned Residues 220 % Identity 10% Template c2w2eA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin; PDBTitle: 1.15 angstrom crystal structure of p.pastoris aquaporin,2 aqy1, in a closed conformation at ph 3.5 Resolution 1.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	T	T	T	V	D	G	A	P	A	S	D	T	D	K	Q	S	I	S	Q	P	N	Q	F	I	K	R	G	T	P	Q	F	M	R	V	T	L	A	L	F	S	A	G	L	A	T	F	A	L	L	Y	C	V	Q	P	I	L	P	V	L	S	Q	E	F	G	L	T	P	A	N	S	S	I	S	L	S	I	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	E	I	K	P	E	D	A	P	Y	I	T	N	A	Y	K	P	A	Y	A	R	W	G	F	G	S	D	S	V	R	N	H	F	I	A	M	S	G	E	F	V	G	T	F	L	F	L	W	S	A	F	V	I	A	Q	I	A	N	Q	A	P	E	T	P	D	G	G	S	N	P	A	Q	L	I	M	I	S	F	G
Template Known Secondary structure							G	G	G	T					S					G	G	G	G			T	T	T	T	S																														T	T	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		82	.	.	.	.	.	.	.	90	.	.																		.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	L	A	I	G	L	L	F	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	S	D	A	I	G	R	K	P	V	M	.	.	V	T	A	L	L	L	A	S	I	C	T	L	L	S	T	M	M	.	.	.	.	.	.	.	.	.	.	.	T	S	W	H	G	I	L	I	M	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	F	G	V	M	V	G	V	F	I	T	Y	R	V	S	G	G	N	L	N	P	A	V	T	L	A	L	V	L	A	R	A	I	P	P	F	R	G	I	L	M	A	F	T	Q	I	V	A	G	M	A	A	A	G	A	A	S	A	M	T	P	G	E	I	A	F	A	N	A	L	G	G	G	A	S	R	T	R	G
Template Known Secondary structure														T	T	T	T					S										T	T	S	S																											S		S	S				S					T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	I	G	L	S	L	S	G	V	A	A	V	G	M	T	Y	L	S	E	E	I	H	P	S	F	V	A	F	S	M	G	L	Y	I	S	G	N	S	I	G	G	M	S	G	R	L	I	S	G	V	F	T	.	.	.	.	.	.	.	.	.	.	.	.	D	F	F	N	W	R	I	A	L	A	A	I	G	C	F
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	L	E	A	F	G	T	A	I	L	C	L	T	V	L	M	L	A	V	E	K	H	R	A	T	W	F	A	P	F	V	I	G	I	A	L	L	I	A	H	L	I	C	I	Y	Y	T	G	A	G	L	N	P	A	R	S	F	G	P	A	V	A	A	R	S	F	P	N	Y	H	W	I	Y	W	L	G	P	I	L
Template Known Secondary structure																				T	T	S		S	T	T	G	G	G																									S												T				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	S	A	L	M	F	W	K	I	L	P	E	S	R	H	F	R	P	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	F	L	A	Y	S	I	W	Q	M	W	K	W	L	N	Y	Q	T	T	N	P
Template Known Secondary structure																T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions