Job Description P61887 Confidence 99.84% Date Thu Jan 5 12:07:25 GMT 2012 Rank 54 Aligned Residues 201 % Identity 18% Template d1w77a1 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	.	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E	Q	P
Query Conservation																																													.
Alig confidence									.	.	.	.	.	.	.	.	.	.																											.																						.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Template Sequence		V	I	L	L	A	G	G	.	.	.	.	.	.	.	.	.	.	S	M	P	K	Q	Y	I	P	L	L	G	Q	P	I	A	L	Y	S	F	F	T	F	S	R	M	P	E	V	K	E	I	V	V	V	C	D	P	F	F	R	D	I	F	E	E	Y	E	E	.	.	.	.	.	S	I	D	V	D	L	R	F	A	I
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.				T	T	T	S			T	T													T		T	T										G	G	G	T					T	T	T	T	.	.	.	.	.	S		S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.														.
Query SS confidence																			.	.														.
Query Sequence		S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	N	.	.	G	E	P	S	C	L	V	L	G	D	N	I	F	.	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L	E
Query Conservation																			.	.														.
Alig confidence																			.	.														.																							.	.	.	.	.	.																			.
Template Conservation																																																									.	.	.	.	.	.																			.
Template Sequence		P	G	K	E	R	Q	D	S	V	Y	S	G	L	Q	E	I	D	V	N	S	E	L	V	C	I	H	D	S	A	R	P	L	V	N	T	E	D	V	E	K	V	L	K	D	G	S	A	V	G	A	A	V	L	G	V	.	.	.	.	.	.	P	A	K	A	T	I	K	E	V	N	S	D	S	L	V	V	T	L	.
Template Known Secondary structure				S	S											T	S		T	T		S							T	T		T	T																	S							.	.	.	.	.	.				S					B		T	T	S		B				.
Template Predicted Secondary structure																																																									.	.	.	.	.	.																			.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	P	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																				.	.													.	.
Template Conservation		.	.	.	.	.	.	.	.	.																				.	.													.	.
Template Sequence		.	.	.	.	.	.	.	.	.	W	E	M	Q	T	P	Q	V	I	K	P	E	L	L	K	K	G	F	E	.	.	L	V	K	S	E	G	L	E	V	T	D	V	.	.	S	I	V	E	Y	L	K	H	P	V	Y	V	S	Q	G	S	Y	T	N	I	K	V	T	T	P	D	D	L	L	L	A	E	R	I	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																				.	.					S								.	.		T	T	G	G	G	S	S									T	T						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																				.	.													.	.
Template SS confidence
											232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions