Job Description P61887 Confidence 99.94% Date Thu Jan 5 12:07:25 GMT 2012 Rank 41 Aligned Residues 217 % Identity 16% Template d1vpaa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.67

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	K	.	G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E
Query Conservation				.
Alig confidence				.													.	.	.																																							.	.
Template Conservation																	.	.	.																																							.	.
Template Sequence		M	N	V	A	I	L	L	A	A	G	K	G	E	R	M	.	.	.	S	E	N	V	P	K	Q	F	L	E	I	E	G	R	M	L	F	E	Y	P	L	S	T	F	L	K	S	E	A	I	D	G	V	V	I	V	T	R	.	.	R	E	W	F	E	V	V	E	K	R	V	F	H	E	K	V	L	G	I	V	E	G
Template Known Secondary structure														G	G	G	.	.	.			S	S		G	G	G				T	T			T	T											T	T		S								.	.	G	G	G						T	T				T	T
Template Predicted Secondary structure																	.	.	.																																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	N	G	E	P	S	C	L	V	L	G	D	N	I	F	.	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L	E
Query Conservation																																		.
Alig confidence																																		.																							.	.	.	.	.	.													.						.
Template Conservation																																																									.	.	.	.	.	.													.						.
Template Sequence		G	D	T	R	S	Q	S	V	R	S	A	L	E	F	L	E	K	F	S	P	S	Y	V	L	V	H	D	S	A	R	P	F	L	R	K	K	H	V	S	E	V	L	R	R	A	R	E	T	G	A	A	T	L	A	L	.	.	.	.	.	.	K	N	S	D	A	L	V	R	V	E	N	D	.	R	I	E	Y	I	.
Template Known Secondary structure			S	S													G	G	G			S							T	T	S																			S							.	.	.	.	.	.				S							T	T	.						.
Template Predicted Secondary structure																																																									.	.	.	.	.	.													.						.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	P	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V	Q
Query Conservation
Alig confidence		.	.	.	.																									.	.	.	.	.	.																			.
Template Conservation		.	.	.	.																									.	.	.	.	.	.																			.
Template Sequence		.	.	.	.	P	R	K	G	V	Y	R	I	L	T	P	Q	A	F	S	Y	E	I	L	K	K	A	H	E	.	.	.	.	.	.	N	G	G	E	W	A	D	D	T	E	P	V	Q	K	L	G	V	K	.	I	A	L	V	E	G	D	P	L	C	F	K	V	T	F	K	E	D	L	E	L	A	R	I	I	A	R
Template Known Secondary structure		.	.	.	.			T	T																				T	.	.	.	.	.	.	T					S	S	S						T	T	T			.								G	G	G					S	T	T
Template Predicted Secondary structure		.	.	.	.																									.	.	.	.	.	.																			.
Template SS confidence
						148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		239	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		217	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions