Job Description P61887 Confidence 99.00% Date Thu Jan 5 12:07:25 GMT 2012 Rank 63 Aligned Residues 180 % Identity 16% Template d1vm8a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases UDP-glucose pyrophosphorylase Resolution 2.50

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	.	.	.	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	.	.	.	.	.	.	.	.	.	.	.	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G
Query Conservation																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.												.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		V	L	L	L	A	G	G	Q	G	T	R	L	G	.	.	.	V	S	Y	P	K	G	X	Y	D	V	G	L	P	S	H	K	T	L	F	Q	I	Q	A	E	R	I	L	K	L	Q	Q	L	A	E	K	H	H	G	N	K	C	T	I	P	W	Y	I	X	T	S	G	R	T	X	E	S	T	K	E	F	F	T	K	H
Template Known Secondary structure								S	B		T	T	T	T	.	.	.		S	S	B	G	G	G		B				T	T			B																					S	S												T	T	T											T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		69	70	.	.	.	.																									.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		S	E	F	G	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Y	A	E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	.	.	.	.	.	.	.	.	L	N	G	E	P	S	C	L	V	L	G	D	N	I	F	F	G	Q	G	F
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	F	G	L	K	K	E	N	V	V	F	F	Q	Q	G	X	L	P	A	X	S	F	D	G	K	I	I	L	E	E	K	N	K	V	S	X	A	P	D	G	N	G	G	L	Y	R	A	L	A	A	Q	N	I	V	E	D	X	E	Q	R	G	I	C	S	I	H	V	Y	C	V	D	N	I	L	V	K	V	A	D
Template Known Secondary structure		G	G	G	G	S		G	G	G														T	T	S		B					T	T									T	T									T	T									T									T	T	B	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.														.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L	E	E	K	P	K	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		P	R	F	I	G	F	C	I	Q	K	G	A	D	C	G	A	K	V	V	E	K	T	N	P	T	E	P	V	G	V	V	C	R	V	D	G	V	.	Y	Q	V	V	E	Y	S	E	I	S	L	A	T	A	Q	R	R	S	S	D	G	R	L	L	F	N	A	G	N	I	A	N	H	F	F	T	V	P	F	L	K	D
Template Known Secondary structure											T	T		S										S	T	T										T	T		.						T	T	T	S								B		T	T	S	S	B	S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		184	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		341	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions