Job Description P61887 Confidence 99.92% Date Thu Jan 5 12:07:25 GMT 2012 Rank 43 Aligned Residues 181 % Identity 17% Template d1vh3a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.70

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	.	.	N	G	E	P	S	C
Query Conservation																																																																										.	.
Alig confidence																																.	.	.								.	.	.																														.	.
Template Conservation																																.	.	.								.	.	.
Template Sequence		V	I	I	P	A	R	P	X	I	Q	H	V	F	E	K	A	L	Q	S	G	A	S	R	V	I	I	A	T	D	N	.	.	.	E	N	V	A	D	V	A	.	.	.	K	S	F	G	A	E	V	C	X	T	S	V	N	H	N	S	G	T	E	R	L	A	E	V	V	E	K	L	A	I	P	D	N	E	I	I	V
Template Known Secondary structure																				T	T		S							S		.	.	.								.	.	.			T	T								S			S	S												T	T			T	T	S
Template Predicted Secondary structure																																.	.	.								.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		104	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.																		.	.	160
Predicted Secondary structure								.																																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	L	G	D	N	.	I	F	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	.	.	.	.	.	V	E	F	D	D	N	F	R	A	I	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	K
Query Conservation								.																																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	Q	G	D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	K	F	N	V	N	X	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V	K	V	L	T	D	K	D	G	Y	V	L	Y	F	S	R	S	V	I	P	Y	D	R	D	Q	F	X	N	L	Q	D	V	Q	K
Template Known Secondary structure					T	T		S																	T	T		S															T		T	T	S							T	T	S	B						S	S		S	S							T	T				T	T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		P	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	.	.	L	E	A	G	N	L	T	V	E	L	L
Query Conservation																																														.	.
Alig confidence																																.	.	.												.	.
Template Conservation																																.	.	.
Template Sequence		V	Q	L	S	D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	K	Q	Y	V	Q	W	A	P	T	.	.	.	Q	L	E	N	L	E	K	L	E	Q	L	R	V	L	Y	N	G	E	R	I	H	V	E	L
Template Known Secondary structure						S																						S				.	.	.							T		T	T						T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions