Job Description P61887 Confidence 99.90% Date Thu Jan 5 12:07:25 GMT 2012 Rank 44 Aligned Residues 209 % Identity 14% Template d1qwja_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E	Q	P	S
Query Conservation
Alig confidence															.	.	.	.	.	.																																				.
Template Conservation															.	.	.	.	.	.																																				.
Template Sequence		A	L	V	L	A	R	G	G	S	K	G	I	P	.	.	.	.	.	.	L	K	N	I	K	R	L	A	G	V	P	L	I	G	W	V	L	R	A	A	L	D	A	G	V	F	Q	S	V	W	V	S	T	D	H	.	D	E	I	E	N	V	A	K	Q	F	G	A	Q	V	H	R	R	S	S	E	T	S	K	D	S
Template Known Secondary structure								S			S	S	S	S	.	.	.	.	.	.		T	T	T	S			T	T															T			S							S		.										T	T								G	G	G	S	S	T	T
Template Predicted Secondary structure															.	.	.	.	.	.																																				.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	N	G	E	P	S	C	L	V	L	G	D	N	I	F	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L	E	E	K	P	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		S	T	S	L	D	A	I	V	E	F	L	N	Y	H	N	E	V	D	I	V	G	N	I	Q	A	T	S	P	C	L	H	P	T	D	L	Q	K	V	A	E	M	I	R	E	E	G	Y	D	S	V	F	S	V	V	R	R	H	Q	F	R	W	S	E	I	Q	K	G	V	R	E	V	T	E	P	L	N	L	N	P	A
Template Known Secondary structure													T	T		T	T		S							T	T		T	T															S	S			S													B					S	S	T	T					B	S	S	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
								162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	P	R	R	Q	D	W	D	G	E	L	Y	E	N	G	S	F	Y	F	A	K	R	H	L	I	E	M	G	Y	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	K	M	A	Y	Y	E	M	R	A	E	H	S	V	D	I	D	V	D	I	D	W	P	I	A	E	Q
Template Known Secondary structure		B				T	T	T	S																				T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S								G	G	G									S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		236	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		258	.	260

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions