Job Description P61887 Confidence 99.95% Date Thu Jan 5 12:07:25 GMT 2012 Rank 40 Aligned Residues 219 % Identity 11% Template d1i52a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.50

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		M	K	.	.	G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A
Query Conservation				.	.
Alig confidence				.	.														.	.	.																																								.	.	.	.	.
Template Conservation																			.	.	.																																								.	.	.	.	.
Template Sequence		L	D	V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	.	.	.	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	.	.	.	.	.	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T
Template Known Secondary structure															G	G	G		.	.	.		S	S		G	G	G	S			T	T													T	S	T	T										T	T	.	.	.	.	.			S	G	G	G	S	G	G	G	G		T	T
Template Predicted Secondary structure																			.	.	.																																								.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																							.											.
Query SS confidence																							.											.
Query Sequence		E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	N	G	.	E	P	S	C	L	V	L	G	D	N	.	I	F	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S
Query Conservation																							.											.
Alig confidence																							.											.																																.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		V	V	D	G	G	D	E	R	A	D	S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	M	.	.	.	.	K	R	A	E	P	G	K	N	A	I	A	H
Template Known Secondary structure							S	S											T	S	T	T		S							T	T		T	T											G	G	G	G	T		S	S										S			.	.	.	.					T	T	S	S	S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	K	P	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F
Query Conservation
Alig confidence				.	.	.	.																									.	.																							.
Template Conservation				.	.	.	.																									.	.																							.
Template Sequence		T	V	.	.	.	.	D	R	N	G	L	W	H	A	L	T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	.	.	R	A	L	N	E	G	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	.	P	Q	L	V	E	G	R	A	D	N	I	K	V	T	R	P	E	D	L	A	L	A	E	F	Y
Template Known Secondary structure				.	.	.	.			T	T																					.	.					T	T					S								T	T			.								T	T						S
Template Predicted Secondary structure				.	.	.	.																									.	.																							.
Template SS confidence
		154	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		237	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		227	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions