Job Description P61887 Confidence 99.93% Date Thu Jan 5 12:07:25 GMT 2012 Rank 42 Aligned Residues 212 % Identity 12% Template d1eyra_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E	Q
Query Conservation
Alig confidence																	.	.	.	.	.	.																																						.	.
Template Conservation																	.	.	.	.	.	.																																						.	.
Template Sequence		N	I	A	V	I	L	A	R	Q	N	S	K	G	L	P	.	.	.	.	.	.	L	K	N	L	R	K	X	N	G	I	S	L	L	G	H	T	I	N	A	A	I	S	S	K	C	F	D	R	I	I	V	S	T	D	G	G	L	.	.	I	A	E	E	A	K	N	F	G	V	E	V	V	L	R	P	A	E	L	A
Template Known Secondary structure										S			S	S	S	T	.	.	.	.	.	.	T	G	G	G				T	T															T			S							S				.	.								T	T
Template Predicted Secondary structure																	.	.	.	.	.	.																																						.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.											.
Query SS confidence																					.	.											.
Query Sequence		P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	N	G	.	.	E	P	S	C	L	V	L	G	D	N	.	I	F	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L
Query Conservation																					.	.											.
Alig confidence																					.	.											.
Template Conservation
Template Sequence		S	D	T	A	S	S	I	S	G	V	I	H	A	L	E	T	I	G	S	N	S	G	T	V	T	L	L	Q	P	T	S	P	L	R	T	G	A	H	I	R	E	A	F	S	L	F	D	E	K	I	K	G	S	V	V	S	A	C	P	X	E	H	H	P	L	K	T	L	L	Q	I	N	N	G	E	Y	A	P	X	R
Template Known Secondary structure		S	T	T															T			S								T	T		T	T											T	T			T	T	T											S	S		T	T	S						S	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		158	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		E	E	K	P	.	.	.	.	.	.	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	S	D	L	E	Q	P	R	Q	Q	L	P	Q	A	F	R	P	N	G	A	I	Y	I	N	D	T	A	S	L	I	A	N	N	C	F	F	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	K	L	Y	I	X	S	H	Q	D	S	I	D	I	D	T	E	L	D	L	Q
Template Known Secondary structure			G	G	G	G	T	S		G	G	G	S																						T	S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T	T	T	T					S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	T	F	V	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	E	N	I	L	N	H
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions