Job Description P61887 Confidence 99.96% Date Thu Jan 5 12:07:25 GMT 2012 Rank 35 Aligned Residues 218 % Identity 17% Template c3tqdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	.	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E	Q	P
Query Conservation																						.
Alig confidence							.	.	.	.	.				.	.	.	.	.			.																																		.	.	.	.	.	.
Template Conservation							.	.	.	.	.				.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		V	I	I	P	A	.	.	.	.	.	R	F	D	.	.	.	.	.	L	P	G	K	A	L	V	D	I	A	G	K	P	X	I	Q	H	V	Y	E	S	A	I	K	S	G	A	E	E	V	V	I	A	T	D	D	.	.	.	.	.	.	K	R	I	R	Q	V	A	E	D	F	G	A	V	V	C	X	T	S	S	D
Template Known Secondary structure							.	.	.	.	.				.	.	.	.	.		T	T	G	G	G				T	T														T	T		S							S		.	.	.	.	.	.										T	T								T	T
Template Predicted Secondary structure							.	.	.	.	.				.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.						10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																		.	.															.																												.	.	.	.
Query SS confidence																		.	.															.																												.	.	.	.
Query Sequence		S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	.	.	N	G	E	P	S	C	L	V	L	G	D	N	I	F	.	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	.	.	.	.	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A
Query Conservation																		.	.															.																												.	.	.	.
Alig confidence																		.	.															.																												.	.	.	.
Template Conservation
Template Sequence		H	Q	S	G	T	E	R	I	A	E	A	A	V	A	L	G	F	E	D	D	E	I	I	V	C	L	Q	G	D	E	P	L	I	P	P	D	A	I	R	K	L	A	E	D	L	D	E	H	D	K	V	A	S	L	C	T	P	I	T	E	V	D	E	L	F	N	P	H	S	T	K	V	V	L	N	R	R	N	Y	A
Template Known Secondary structure				S												T	T			T	T								T	T																																				T		T	T	S							T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		155	.	.	.	.	160	.															.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	L	E	E	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation																																																																.
Template Sequence		L	Y	F	S	H	A	P	I	P	W	G	R	D	T	F	S	D	K	E	N	L	Q	L	N	G	S	H	Y	R	H	V	G	I	Y	A	Y	R	V	G	F	L	E	E	Y	L	S	W	D	A	C	P	A	E	K	X	E	A	L	E	Q	L	R	.	I	L	W	H	G	G	R	I	H	X	V	V	A	K	S	K	C
Template Known Secondary structure						S	S		S	S			T	T	T	T	T		G	G	G				S	S																						S										T		T	T			.				T	T									S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	G	V	D	T	E	E	D	L	E	R	V	R	A	Y	F
Template Known Secondary structure						S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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