Job Description P61887 Confidence 99.97% Date Thu Jan 5 12:07:25 GMT 2012 Rank 34 Aligned Residues 226 % Identity 17% Template c3polA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: 2.3 angstrom crystal structure of 3-deoxy-manno-octulosonate2 cytidylyltransferase (kdsb) from acinetobacter baumannii. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		M	K	G	I	I	L	A	G	G	S	G	T	.	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E
Query Conservation														.
Alig confidence														.				.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation																		.	.	.	.	.	.																																					.	.	.	.	.
Template Sequence		M	K	H	I	V	I	P	A	R	F	S	S	S	R	L	P	.	.	.	.	.	.	G	K	P	L	L	L	I	H	D	R	P	M	I	L	R	V	V	D	Q	A	K	K	V	E	G	F	D	D	L	C	V	A	T	D	D	E	.	.	.	.	.	R	I	A	E	I	C	R	A	E	G	V	D	V	V	L	T	S
Template Known Secondary structure											S			T	T	S	T	.	.	.	.	.	.	T	G	G	G	S			T	T												T	T			S		S							S			.	.	.	.	.								T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.																																					.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.							.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150
Predicted Secondary structure																				.	.															.																		.																	.	.	.	.	.
Query SS confidence																				.	.															.																		.																	.	.	.	.	.
Query Sequence		Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	.	.	N	G	E	P	S	C	L	V	L	G	D	N	I	F	.	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	.	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	.	.	.	.	.	V	V	E	F	D	D
Query Conservation																				.	.															.																		.																	.	.	.	.	.
Alig confidence																				.	.															.																		.																	.	.	.	.	.
Template Conservation
Template Sequence		A	D	H	P	S	G	T	D	R	L	S	E	V	A	R	I	K	G	W	D	A	D	D	I	I	V	N	V	Q	G	D	E	P	L	L	P	A	Q	L	V	Q	Q	V	A	K	L	L	V	D	K	P	N	C	S	M	S	T	L	C	E	P	I	H	A	L	D	E	F	Q	R	D	S	I	V	K	V	V	M	S	K
Template Known Secondary structure		S																	T			T	T								T	T		T	T																	T	T		S																	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.														.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	F	R	A	I	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	K	P	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template Conservation																																																																			.
Template Sequence		Q	N	E	A	L	Y	F	S	R	A	T	I	P	Y	D	R	D	G	A	K	R	D	E	P	T	L	H	T	Q	A	F	R	H	L	G	L	Y	A	Y	R	V	S	L	L	Q	E	Y	V	T	W	E	M	G	K	L	E	K	L	E	S	L	E	Q	L	R	.	V	L	E	N	G	H	R	I	A	I	A	V	A	E
Template Known Secondary structure		S	S	B						S	S			S			S	S	S	S	S	S	S	S					S																				T	T	S										T		T	T			.				T	T									S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	L	P	P	G	V	D	T	Q	A	D	L	D	R	L	N	N	M	P	V
Template Known Secondary structure		S								S									T	S		G
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions