Job Description P61887 Confidence 99.88% Date Thu Jan 5 12:07:25 GMT 2012 Rank 48 Aligned Residues 199 % Identity 11% Template c3okrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd) Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	.	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E	Q	P	S	P	D	G	L	A
Query Conservation																																							.
Alig confidence										.	.	.																											.																									.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																																				.	.	.	.	.	.	.	.
Template Sequence		G	E	V	V	A	I	V	P	.	.	.	A	A	P	K	A	F	Y	Q	L	D	G	Q	T	L	I	E	R	A	V	D	G	L	L	D	S	G	V	V	D	T	V	V	V	A	V	P	A	D	R	T	D	E	A	R	Q	I	L	G	H	R	A	.	.	.	.	.	.	.	.	M	I	V	A	G	G	S	N	R	T
Template Known Secondary structure										.	.	.				G	G	G				T	T														T	S											G	G	G									G	G	G		.	.	.	.	.	.	.	.							S	S
Template Predicted Secondary structure										.	.	.																																																				.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.
		88	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure												.													.
Query SS confidence												.													.
Query Sequence		Q	A	F	I	I	G	E	T	F	L	.	N	G	E	P	S	C	L	V	L	G	D	N	.	I	F	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L	E	E	K	P	K	Q	P	K
Query Conservation												.													.
Alig confidence												.													.																																.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		D	T	V	N	L	A	L	T	V	L	S	E	P	E	F	V	L	V	H	D	A	A	R	A	L	T	P	P	A	L	V	A	R	V	V	E	A	L	R	D	G	Y	A	A	V	V	P	V	L	P	L	S	D	T	I	.	.	.	.	.	K	A	V	D	A	N	G	V	V	L	G	T	P	E	R	A	G	L	R	A
Template Known Secondary structure										T	T				S							T	T		T	T															T	T		S									S	S			.	.	.	.	.					T	T	S							T	T	S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V	Q
Query Conservation
Alig confidence				.	.	.	.														.	.	.	.	.	.	.	.	.	.																	.
Template Conservation				.	.	.	.														.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		V	Q	.	.	.	.	T	P	Q	G	F	T	T	D	L	L	L	R	S	.	.	.	.	.	.	.	.	.	.	Y	Q	Y	T	D	D	A	S	L	V	E	H	I	G	G	Q	.	V	Q	V	V	D	G	D	P	L	A	F	K	I	T	T	K	L	D	L	L	L	A	Q	A	I	V	R
Template Known Secondary structure				.	.	.	.	S													.	.	.	.	.	.	.	.	.	.	T												T	T			.								G	G	G					S												T
Template Predicted Secondary structure				.	.	.	.														.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		163	.					.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions